Gene
RNA
| Item | Value |
|---|---|
| gene id | G703147 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048572.1 |
| NCBI id | CM023226.2 |
| chromosome length | 91622588 |
| location | 36710626 ~ 36710921 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| Transposable element Tc1 transposase |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU799939 | True | 296 | lncRNA | 0.49 | 1 | 36710626 | 36710921 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| gzf1 | LOC106571746 | coding | downstream | 28288 | 36674680 ~ 36682338 (-) |
| trnaa-ugc-26 | NA | coding | downstream | 53988 | 36656565 ~ 36656638 (-) |
| LOC110529875 | LOC106571742 | coding | downstream | 84565 | 36619101 ~ 36626061 (-) |
| LOC110529872 | LOC106571739 | coding | downstream | 158494 | 36543815 ~ 36552132 (-) |
| LOC110529236 | plcb1 | coding | downstream | 219888 | 36216234 ~ 36490738 (-) |
| LOC110529879 | LOC106571770 | coding | upstream | 438402 | 37149323 ~ 37271260 (-) |
| LOC110529880 | LOC106571768 | coding | upstream | 644179 | 37355096 ~ 37361922 (-) |
| opn8a | LOC106608050 | coding | upstream | 714817 | 37425738 ~ 37456935 (-) |
| LOC110530908 | otof | coding | upstream | 763308 | 37474229 ~ 37626960 (-) |
| sod2 | sod2 | coding | upstream | 1071253 | 37782174 ~ 37792728 (-) |
| G703117 | NA | non-coding | downstream | 10656 | 36637232 ~ 36699970 (-) |
| G703087 | NA | non-coding | downstream | 65890 | 36643320 ~ 36644736 (-) |
| G703062 | NA | non-coding | downstream | 134642 | 36539491 ~ 36575984 (-) |
| G702295 | NA | non-coding | downstream | 225159 | 36483708 ~ 36485467 (-) |
| G702161 | NA | non-coding | downstream | 450802 | 36259368 ~ 36259824 (-) |
| G703155 | NA | non-coding | upstream | 8175 | 36719096 ~ 36719296 (-) |
| G703179 | LOC106571747 | non-coding | upstream | 51284 | 36762205 ~ 36767971 (-) |
| G703198 | NA | non-coding | upstream | 67923 | 36778844 ~ 36779547 (-) |
| G703301 | NA | non-coding | upstream | 221115 | 36932036 ~ 36932240 (-) |
| G703387 | NA | non-coding | upstream | 347651 | 37058572 ~ 37059267 (-) |
| G701618 | LOC106571560 | other | downstream | 792451 | 35900623 ~ 35918175 (-) |
| LOC110529865 | LOC106571568 | other | downstream | 1005313 | 35633473 ~ 35705333 (-) |
| G701454 | NA | other | downstream | 1120749 | 35582998 ~ 35589877 (-) |
| ankef1a | LOC106571587 | other | downstream | 2686741 | 34017010 ~ 34029131 (-) |
| G699468 | NA | other | downstream | 2758270 | 33943022 ~ 33952356 (-) |
| G704702 | NA | other | upstream | 1326804 | 38037725 ~ 38038346 (-) |
| G704874 | NA | other | upstream | 1602568 | 38313489 ~ 38313803 (-) |
| G706683 | stxbp5 | other | upstream | 2508723 | 39219644 ~ 39226313 (-) |
