G703548


Basic Information

Item Value
gene id G703548
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 37428107 ~ 37429823 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU800378
TACTTTATTCAGAGAGCGCTCTGTCTTCAAAATGAGAACAGTCTTtttattgcacacacacacacacaaatgaactcACATCAGTAGAAGCTCCACCTCGCTTTAGGTGGGCTGTATTTTTCCACAGTTCACATGCATTGTTTATCACACTTCtgcaacatgtttcattatcttcTGCAAGCCTAGCCGTTTCTAACAGTTTTTCTCCTCCCTAGGGTGGTGAGGCCTCTTTCCAGTTATTAGTTTCACCGTTATCACAAGTCGACAGTTCAGTTGTCCTTCAATGTCTCAACTATACCCGGCTCATATTGCGAAATAGTAACACAGTGGCCTAGTCTTAAAAGGTCTAGTCACACAGATTATTGGATTATGACTAACATATTTCATACAGTTATATGGTTTCAGGATGGAATATTTTAGTCATTATcagcaagttggttaggatgatatctttgagggtgcccatgtttacggatttggggttgtacctggtaggttcattgataatttgtgttagattgagggcatcaagcttagattgtaggacagctgagttgttaagcatgtcccagttcaggtcacctagcagcacaagctctgaagatagatggggagcaatcaattcacatatggtgtccagggcacagctgggggcaaagggtggtctatagcaagcagcaacATTGAGAggcttgtttctggaaaggtggatttttaaaagtagaagctctaattgtttgggtacagacctggatagtaagacaaaACTCTGCAggcaactctgccccctttggcagttctatcttgtcggaaaatgttatagttagggatggaaacttcagggtttttggtggtcttcctaagccagcattcagacatggctaggacatccgggttggcagagtgtgctaaagcagtgaataaatcaaacttagggaggaggcttctaatgttaacatgcatgaaaccaaggctggGGTATAGGagtgcagggcctggattaacctttCCATTACCagatgaacagaggaggagtaggataagggtacggctaaaggctataagaactggtcgacTAGtatgttcggaacagagagtaaaaggagcaggtttctgggcacgatagaatagattcaaggcataatgtacagacaaaggtatggtaggatgtgaatacattggtggtaaacctaggcattgagtgatgatgagagagatattgtctctagaaacatttaAACCAGCTGATGTCACCGcctgtgtgggaggtggaactaaagggttggctaaggcatattgagcagggctagaggctctacagtgaaataagacaataatcactaaccagaacagcaatggacaaggcatattgacattatgGAGAGGCATGATTTATCCACTCGCTAGCTATCCCACCTGGAAAGATATTACTTTGTTTTtgcgctgtttgtttgtttacaaaGGATGAATTATACAACTCTGGTTAGATATCAAAACAGTACCAGTTTTGCTGACATTTTGGAAAATTATATTTATCCGGGCAAAACCCTATTTCACGCTGGTTCCACTACTTAGGGTCTTTCAGACATGGGGCTCAAGCAGAGCTCATGACTGACTGTGACAAAGCGTACAAGTCTAGATCACGAGAAACGCTTTAGTCCCTGTCAAATTTGGCTGCCTCAGGTTAAGAAGTTTGACATGGCTGTAAACATAGTCT

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU800378 True 1717 lncRNA 0.43 1 37428107 37429823

Neighbor

gene id symbol gene type direction distance location
LOC110529880 LOC106571768 coding downstream 66185 37355096 ~ 37361922 (-)
LOC110529879 LOC106571770 coding downstream 156847 37149323 ~ 37271260 (-)
gzf1 LOC106571746 coding downstream 745769 36674680 ~ 36682338 (-)
trnaa-ugc-26 NA coding downstream 771469 36656565 ~ 36656638 (-)
LOC110529875 LOC106571742 coding downstream 802046 36619101 ~ 36626061 (-)
LOC110530908 otof coding upstream 44406 37474229 ~ 37626960 (-)
sod2 sod2 coding upstream 352351 37782174 ~ 37792728 (-)
acbd3 LOC106571761 coding upstream 388049 37817872 ~ 37851844 (-)
LOC110530910 LOC106571760 coding upstream 429434 37859257 ~ 37879878 (-)
LOC110530911 parp1 coding upstream 475347 37905170 ~ 37921411 (-)
G703547 mut non-coding downstream 4823 37390375 ~ 37423284 (-)
G703617 NA non-coding downstream 14550 37412941 ~ 37413557 (-)
G703503 NA non-coding downstream 152891 37252873 ~ 37275216 (-)
G703509 NA non-coding downstream 166059 37261736 ~ 37262048 (-)
G703627 NA non-coding upstream 12444 37442267 ~ 37442613 (-)
G703647 drc1 non-coding upstream 41068 37470891 ~ 37472743 (-)
G703648 NA non-coding upstream 44929 37474752 ~ 37477292 (-)
G703653 NA non-coding upstream 69116 37498939 ~ 37506549 (-)
G703684 NA non-coding upstream 119104 37548927 ~ 37586929 (-)
G701618 LOC106571560 other downstream 1509932 35900623 ~ 35918175 (-)
LOC110529865 LOC106571568 other downstream 1722794 35633473 ~ 35705333 (-)
G701454 NA other downstream 1838230 35582998 ~ 35589877 (-)
ankef1a LOC106571587 other downstream 3404222 34017010 ~ 34029131 (-)
G704702 NA other upstream 607902 38037725 ~ 38038346 (-)
G704874 NA other upstream 883666 38313489 ~ 38313803 (-)
G706683 stxbp5 other upstream 1789821 39219644 ~ 39226313 (-)
slc22a16 LOC106571810 other upstream 2527138 39956961 ~ 40017167 (-)

Expression


Co-expression Network