G703647 (drc1)


Basic Information

Item Value
gene id G703647
gene name drc1
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 37470891 ~ 37472743 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU800482
ctccctccctccctcccttctcttcttccctcccccctccttaCCTGGGTCTGCTCCCCTTGTGTATGTCTGTACTTCATGAAGAAATCCGCCAGCTTGTACACGTCCTCCTCGCTCTCGATCCCCATGGCCTGGCAGAAAAGAACAGAGCGGAGACAACACTGGCACAGCTCCTCTGTCGCGACTGTCCTGTGTTTATGTGACAGTAAATGTATAGTTACAGGTGACATAACATACATATAGCCGTCACGTTGTAACTCACAGTGAAGATGGAGTCCAGCTTCATGAGGGACTGTTCATCCTTCTCCAGTGGAGAGAGAAGCTTCAGAAGTTTACTCTCTATCAGAAAACCCTgtggaggtgagggagggaaggagagagagacagagaagcttCAGAAGTTTACTCTCTATCAGAAAACCCAgtggaggtgagggagggaaggagagagagacagagaagcttCAGAAGTTTACTCTCTATCAGAAAACCCTgtggaggtgagggagggaaggagagagagacagagaagcttCAGAAGTTTACTCTCTATCAGAAAACCCTGTGGAGGtgacggagggaaggagagagagacagagaagcttCAGAAGTTTACTCTATCAGAAAACCCTGTGGAGgtgagggagggaaggagagagagacagagaagctgTAAAGGCTAAATGTTGAAGTAGTTGAGTTAGATGACacagttcctcttcctctctctattcctctgtcatacagacacacaaactctTAGCCCGCTGTTGGAGGAAATTATAGTTGAAATgattaattatgtatacatttaaattAGAACCATTTATTTTAATACTATTATGTTATGGTATGAAATGTATGGGTTCTTGGTTAAACTAGGACTGAAAATGTAGGTATAACGAATTAATTGTCTGTACCTTGCGGGTTTAAGGGAGAGGGATGGCATCTCTCTTTAGACAGATAAAAACGTTTGTTTTATGATCCATTAGTGGAGAAGAGTATATATTTTTAGACAGATTGGAATGTTTGTTTTATGAGGGGAGTAGAAGACAATTTCCAGACCTGAAGACACTGCGCTATTGTGTGGAtcggagagagtgtgagaaactGATGACGTCACTTTTATCTTCTCTCTTTAAAATGTAATGTTCTTTGTATTTTGGgtcagtactctcttgaattaaacgctGTTACCTGACTTTTAAGACTGGTCTCGATCTATTTCATGCATAAATGATAAACTTACAACTTATTATGAAATAGAGAGAGTGTGAATTTGGTTTTGGCTACAAAACATATAGGAATTTAGAATTCCTCTAACACCCGCTCACCGCCTCGTCACACAGCAGCTCCAGGAGCTTCTTGACAATCTTCACCGACACCGTCCCACTGtgctccccctcactcccttccctctctctctccacctcactgCTCCCACTCTCCAGCCCTGCTCCTGAGTCATACACCTCCACAGCCAACCCAGGGCTCTCTGCCCCAGGCCCAACCCCGGCCTCCTGgtacttccccttccccaggccACTGGTCTGCCCAAGCTGGAGCAGCTCGGAGATTGCCTGGTGCGCAGTCTTCTGGGTCTGTCTATGGGGCTGAAGGGGGCCGCAGCGCTCCATGAAAGCCAGTGATGGGCGCTGCCAGGCCAGGCCCAACTGCTGCTCGTGGACCAGCCGGTCTGTATCCAGGGCCTTCTCCACCAGCGCCTTGACCTCCTCCTCGTTCATCAGCCACACCTCCTCAAACTTCTTGGCATCGATGGCCGCA
>TU800483
ctccctccctccctcccttctcttcttccctcccccctccttaCCTGGGTCTGCTCCCCTTGTGTATGTCTGTACTTCATGAAGAAATCCGCCAGCTTGTACACGTCCTCCTCGCTCTCGATCCCCATGGCCTGGCAGAAAAGAACAGAGCGGAGACAACACTGGCACAGCTCCTCTGTCGCGACTGTCCTGTGTTTATGTGACAGTAAATGTATAGTTACAGGTGACATAACATACATATAGCCGTCACGTTGTAACTCACAGTGAAGATGGAGTCCAGCTTCATGAGGGACTGTTCATCCTTCTCCAGTGGAGAGAGAAGCTTCAGAAGTTTACTCTCTATCAGAAAACCCTgtggaggtgagggagggaaggagagagagacagagaagcttCAGAAGTTTACTCTCTATCAGAAAACCCAgtggaggtgagggagggaaggagagagagacagagaagcttCAGAAGTTTACTCTCTATCAGAAAACCCTgtggagGtgacggagggaaggagagagagacagagaagcttCAGAAGTTTACTCTATCAGAAAACCCTGTGGAGGtgacggagggaaggagagagagacagagaagcttCAGAAGTTTACTCTATCAGAAAACCCTgtggaggtgagggagggaaggagagagagacagagaagctgTAAAGGCTAAATGTTGAAGTAGTTGAGTTAGATGACacagttcctcttcctctctctattcctctgtcatacagacacacaaactctTAGCCCGCTGTTGGAGGAAATTATAGTTGAAATgattaattatgtatacatttaaattAGAACCATTTATTTTAATACTATTATGTTATGGTATGAAATGTATGGGTTCTTGGTTAAACTAGGACTGAAAATGTAGGTATAACGAATTAATTGTCTGTACCTTGCGGGTTTAAGGGAGAGGGATGGCATCTCTCTTTAGACAGATAAAAACGTTTGTTTTATGATCCATTAGTGGAGAAGAGTATATATTTTTAGACAGATTGGAATGTTTGTTTTATGAGGGGAGTAGAAGACAATTTCCAGACCTGAAGACACTGCGCTATTGTGTGGAtcggagagagtgtgagaaactGATGACGTCACTTTTATCTTCTCTCTTTAAAATGTAATGTTCTTTGTATTTTGGgtcagtactctcttgaattaaacgctGTTACCTGACTTTTAAGACTGGTCTCGATCTATTTCATGCATAAATGATAAACTTACAACTTATTATGAAATAGAGAGAGTGTGAATTTGGTTTTGGCTACAAAACATATAGGAATTTAGAATTCCTCTAACACCCGCTCACCGCCTCGTCACACAGCAGCTCCAGGAGCTTCTTGACAATCTTCACCGACACCGTCCCACTGtgctccccctcactcccttccctctctctctccacctcactgCTCCCACTCTCCAGCCCTGCTCCTGAGTCATACACCTCCACAGCCAACCCAGGGCTCTCTGCCCCAGGCCCAACCCCGGCCTCCTGgtacttccccttccccaggccACTGGTCTGCCCAAGCTGGAGCAGCTCGGAGATTGCCTGGTGCGCAGTCTTCTGGGTCTGTCTATGGGGCTGAAGGGGGCCGCAGCGCTCCATGAAAGCCAGTGATGGGCGCTGCCAGGCCAGGCCCAACTGCTGCTCGTGGACCAGCCGGTCTGTATCCAGGGCCTTCTCCACCAGCGCCTTGACCTCCTCCTCGTTCATCAGCCACACCTCCTCAAACTTCTTGGCATCGATGGCCGCA

Function

symbol description
drc1 Predicted to be involved in axonemal dynein complex assembly; cilium-dependent cell motility; and regulation of cilium movement. Predicted to be located in cytoplasm; cytoskeleton; and motile cilium. Predicted to be part of axonemal dynein complex. Predicted to be active in axoneme. Is expressed in Kupffer's vesicle; axis; basal plate midbrain region; nervous system; and pronephric duct. Human ortholog(s) of this gene implicated in primary ciliary dyskinesia 21. Orthologous to human DRC1 (dynein regulatory complex subunit 1).

NR:

description
dynein regulatory complex protein 1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU800482 False 1785 lncRNA 0.48 2 37470891 37472743
TU800483 True 1783 lncRNA 0.48 2 37470891 37472743

Neighbor

gene id symbol gene type direction distance location
opn8a LOC106608050 coding downstream 13956 37425738 ~ 37456935 (-)
LOC110529880 LOC106571768 coding downstream 108969 37355096 ~ 37361922 (-)
LOC110529879 LOC106571770 coding downstream 199631 37149323 ~ 37271260 (-)
gzf1 LOC106571746 coding downstream 788553 36674680 ~ 36682338 (-)
trnaa-ugc-26 NA coding downstream 814253 36656565 ~ 36656638 (-)
LOC110530908 otof coding upstream 1486 37474229 ~ 37626960 (-)
sod2 sod2 coding upstream 309431 37782174 ~ 37792728 (-)
acbd3 LOC106571761 coding upstream 345129 37817872 ~ 37851844 (-)
LOC110530910 LOC106571760 coding upstream 386514 37859257 ~ 37879878 (-)
LOC110530911 parp1 coding upstream 432427 37905170 ~ 37921411 (-)
G703627 NA non-coding downstream 28278 37442267 ~ 37442613 (-)
G703548 NA non-coding downstream 41068 37428107 ~ 37429823 (-)
G703547 mut non-coding downstream 47607 37390375 ~ 37423284 (-)
G703617 NA non-coding downstream 57334 37412941 ~ 37413557 (-)
G703503 NA non-coding downstream 195675 37252873 ~ 37275216 (-)
G703648 NA non-coding upstream 2009 37474752 ~ 37477292 (-)
G703653 NA non-coding upstream 26196 37498939 ~ 37506549 (-)
G703684 NA non-coding upstream 76184 37548927 ~ 37586929 (-)
G704025 NA non-coding upstream 277859 37750602 ~ 37750921 (-)
G704028 NA non-coding upstream 280724 37753467 ~ 37753666 (-)
G701618 LOC106571560 other downstream 1552716 35900623 ~ 35918175 (-)
LOC110529865 LOC106571568 other downstream 1765578 35633473 ~ 35705333 (-)
G701454 NA other downstream 1881014 35582998 ~ 35589877 (-)
ankef1a LOC106571587 other downstream 3447006 34017010 ~ 34029131 (-)
G704702 NA other upstream 564982 38037725 ~ 38038346 (-)
G704874 NA other upstream 840746 38313489 ~ 38313803 (-)
G706683 stxbp5 other upstream 1746901 39219644 ~ 39226313 (-)
slc22a16 LOC106571810 other upstream 2484218 39956961 ~ 40017167 (-)

Expression


Co-expression Network