G703648


Basic Information

Item Value
gene id G703648
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 37474752 ~ 37477292 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU800487
CACTTCCACTTTCCTTTGTTAATACTCACATCCACCAAACAacatcccccagtctctccatcaGTACCCTCCCCCCAAACACACTCGCCTCAGTGCTGCTAACCATGGCAGTGCTGCTCAACACACATACTCAAGGACTTCCTATCCCTTGGTCTTCTGAAAACTAGGAACAACCATCTACTTTCGACTGCTACAGTAGCACAGTGGGCCTAACCGATCAAATGCTTCAGGACGCTAACCAATCAGAAACCTCATCCCTGCACTGGCCACTGACTAACCAATCAAACAACTCAACCCTGATCTCATCATCAGCAATGCAGCAAACCCTGATGTTACATTTCAGAGATGGTTTATTTACCTATGTATGTATTTGTTTATTCATGACTTAAATTGATTTGGAAGTTGCCGGAGTCTGGTGTAGCAATCTAAGCTTCCGATTCCGGACTACACATGCCCCCTGTCGATGGGGATTCGATCCCCGGCTCGGCGGATTGTCCGCGCCCTtcctttctgtatctctctccattGTCTACTATTCTGTACTTATAACTGTCTtgtcaataaaataataataaatatggaAGGCGATCGGAGCTCCTGGTCTCCTAAAAACATATACAATTATTTGGAAGGACATGGTTAGTTTGATCATTTCTCAAGTGATGTTGTAATCATTTCCATtactatttatttaactaggcaagtcagttaagaacaaattcttatttaccatgacggcctaggaacagtgggtgaactgccttgttgaggggcagaacgacaggttttttaccttgtcagctcggggattcaatctagcaacttctcggttactggtccaacgctctaaccactaggctacctgccaccccatgagACAGTGCCTTCAGTGccattgactttttcaaaattttgtCATGTTGCAAACCTGAATTTAACATTTCATACAGGGATTCAAacgcaaagaccagggagattttccaatgcctggcaaagaagggaacctattggtagatacaatttaaaaagcagacattataAAGAGGTTATCAAagttgcttgttctgcccactatgattcaTTTTCTCCCTTCAGAAATGATAGGCTGTGGTCTATATTGGGTTAGTTATAACAAATCTTTGTTAGGGTTATTGCTTGTAATCGATAAGGACTGGGGagcttttcaggataaaaaataaacgttatggagcttggcacaggcaaaatcctagaggaaaacctgtttcagtctgatttccaccagacactgggagaaaaatttgcctttcagcaggacaataagctaaaacacaaggccaacaCTCAAGTGGCTGAGTTaccgttttgacttaaatctacttgaaaatctatggcaagacctgaaaattattgtctaccaatgatcaacaaccaatttcacCAAGCTTGAAGAAGTTAGAAAATAAGAATGGTCTTagagacccagaaagactcacggctgtaatcgctatcaacacaacaaaatgtggaataagtcaaggggtttgaatactttctgaaggcactgtgtgtcgGTTTCCAAATGGGAATCATGGGGTTGGTGTGAGCTCTTGAACTggatcaaatgaaatgtttttccaacagttcATTAGCGTTCCTCTTTAGCTCTTGCAGCCTGTGCACACGTCTTCTAAAATAATGAGACTGAAAACAGGTGTCTATTTTCCTACTGTAGTTTAACAAGATTTAAAGAGGGACAAGGAATACAAGAATAGCTTTCGAATATGAATCCATTAGAGAAGTAAACTTGCTATTGTTTGGCTTAAATTATGTCGTCAAACACCAACATTTTATGGAACAAAGTTTGTTTCTTCACCACTTTCTTCAGTGACCTGGAATGCTCTTATTGGTTCTTAGTTATCCAGTTAAAATATCCAGTAGTTTTAGAGTAATATAAGCATGCATCTGTATTCTAACATCTCACGGTGATTGAGTTCACATGGTCATCAGATATGGCATGACTTCCTTTCTACTATAGCTTTTACAGTCGGCTTCTAAACCTTTTATCTGTATGGATCCTGACACGTTTTAATCCATGCAGATTTTCCCGGAAGTGGTTATGTGCACCTTATAGCACAAGAGGTCCGGTAAAAGGGAGGTGTGGCTTGGCCTCTTGACCTCTGCCCTGTCGGCCTGTCAGATGACTTTGTTTGCAGTGTGCAGTTCCCTCTGGTTTTCCCTTGCTTGACCTACTTGTAGTTATGACATCATTTGTGTTGCAGTCATTTTAGTGATCTCATGTTCACAAAATACAAAACCAACAAAAATGGATTTTGTTTGCACTAACACTAAGTCTATTATATTCTCCTGTTGATGAGTATGCAATACAAACATTTAGTCTGTTTTAACAATGATCTTAAATAAATGGAATTAATT

Function

NR:

description
unnamed protein product

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU800487 True 2415 lncRNA 0.40 2 37474752 37477292
Loading

Neighbor

gene id symbol gene type direction distance location
opn8a LOC106608050 coding downstream 17817 37425738 ~ 37456935 (-)
LOC110529880 LOC106571768 coding downstream 112830 37355096 ~ 37361922 (-)
LOC110529879 LOC106571770 coding downstream 203492 37149323 ~ 37271260 (-)
gzf1 LOC106571746 coding downstream 792414 36674680 ~ 36682338 (-)
trnaa-ugc-26 NA coding downstream 818114 36656565 ~ 36656638 (-)
sod2 sod2 coding upstream 304882 37782174 ~ 37792728 (-)
acbd3 LOC106571761 coding upstream 340580 37817872 ~ 37851844 (-)
LOC110530910 LOC106571760 coding upstream 381965 37859257 ~ 37879878 (-)
LOC110530911 parp1 coding upstream 427878 37905170 ~ 37921411 (-)
LOC110531088 NA coding upstream 452826 37930118 ~ 37931963 (-)
G703647 drc1 non-coding downstream 2009 37470891 ~ 37472743 (-)
G703627 NA non-coding downstream 32139 37442267 ~ 37442613 (-)
G703548 NA non-coding downstream 44929 37428107 ~ 37429823 (-)
G703547 mut non-coding downstream 51468 37390375 ~ 37423284 (-)
G703617 NA non-coding downstream 61195 37412941 ~ 37413557 (-)
G703653 NA non-coding upstream 21647 37498939 ~ 37506549 (-)
G703684 NA non-coding upstream 71635 37548927 ~ 37586929 (-)
G704025 NA non-coding upstream 273310 37750602 ~ 37750921 (-)
G704028 NA non-coding upstream 276175 37753467 ~ 37753666 (-)
G704035 NA non-coding upstream 282975 37760267 ~ 37760785 (-)
G701618 LOC106571560 other downstream 1556577 35900623 ~ 35918175 (-)
LOC110529865 LOC106571568 other downstream 1769439 35633473 ~ 35705333 (-)
G701454 NA other downstream 1884875 35582998 ~ 35589877 (-)
ankef1a LOC106571587 other downstream 3450867 34017010 ~ 34029131 (-)
LOC110530908 otof other upstream 11935 37474229 ~ 37626960 (-)
G704702 NA other upstream 560433 38037725 ~ 38038346 (-)
G704874 NA other upstream 836197 38313489 ~ 38313803 (-)
G706683 stxbp5 other upstream 1742352 39219644 ~ 39226313 (-)
slc22a16 LOC106571810 other upstream 2479669 39956961 ~ 40017167 (-)

Expression

G703648 Expression in all Baseline Samples

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G703648 Expression in each Bioproject

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G703648 Expression in each Sample
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The chart has 1 Y axis displaying Expression. Range: 0 to 150.
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Co-expression Network