G704806


Basic Information

Item Value
gene id G704806
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 38226612 ~ 38230493 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU801722
TTTTTTTGTTAGTTAACTTCAATGAATCACGATCCACCATAGCATGTCAACAATGACAACGGCTGGCTACTGTTTAAGTGATAGTTTGACGGTCAAATCtgtgtattggtgtgtggccAGCAACTTTTATAGAGAGACCGCAACTAATTATTCATGCTATTTGAGAAAGAAATGTATAGCGTTCTAAGTCCTGCGACCCCAGCGCTTATGACAAAATTAACAGTACAAAACCGAAGGTATTGATCTGTTTTAAGCAATTGATCTTGTCATCATGTTTACTATAAAATTTTCACATTCTCAATCTCAGTTAAAAAGGATGTGTAATTCCCCCCAATTCGATGGGGTCAGCTTTTACAATGTAGTAGCACATACTGTCCACATCATGGAAAGTAGCATAATATAAATTAATTAGACATAGAAAATGTATATAATATCTTAATTTAGGATGACCGTAAATGTAGTAAACTCAGATTTCTCCAATAATAACATATATTTCTTACTAGTTTAACCATTAAGAAATGTAAAATAAATTCTTAAGCACAATTTAACTGGGTGCTCTAGAAAGAGCTCGCATTGTGACTTTGTAGCAGCCATTTGTTTGTCGCAACTTTCCTCGTTTTGGATCACTGTAACCAACAAACATGTCCCCTGTACCTCTCCTTTGAGaatgaaaaaaaatatgtttcaaGGGATATgtatactttcagaaggcactgtagcaCCAGGTTATTGCTAGTTACTCATTCTAATACCGACTGAACCTCCATGTTAACCCTCCTACTGTGTTCCGGTCGTACCGATTTACAAGTTTTTTCTCTGAAATATGTATTtgatttaatctgattgtcataaggttccatgactttgtccataCAGGGCAtttgaacacacaaaatacattttcattacattttgggtgttttatttaacttttgtacacctgtggtgttcctgGTCAAAAATGACTGGTCATTAGAAATTAATGGGTGAGGCGACAATTAGCGATTAAAATTGATTTCAGGcacattcatcagatggacacacttcctcccccagacccccacatgcatgtgtatttgagcacacacacacacacctacctcactccccttcttggcttccatagcaacctttccccaatagaatctttcccccaccggaaccacacctgttggcatacTTACAAACAATCGcatcattgtttcaataataCATGGAACTTTTCTCGCAGTTCTGGTATGtaaaagcttttttgaggccttgctcacaattcatccTCTGGCAGCACAATAaccaaacgatatactgtatgtgaggctcttgatcatgacactggtgaggaggagagaggccaggaAACTGACAGTGAAGATTCATTAGAGTAGGAAGTGTCAGAAGTTGAAGACAACACAGAATATGATCTAGACAAAGAGACAACCGATGTGGAACAATCCATTGATGaagaagagggccctgctgagttTGTTGCTACATTCCGGTCAAAGAATGGGAATTTGTCCTGGTCTTCATCCCCACCTGAGAGGAGAGGTCGGCTGTCGGCTGAAAATGCTataaggatgaccccagggccaaGGAGATATGCCATATCCTGGGTtgatgatatacagttgaagttggaagtttggaagaactgtttggccataatgaccattgttatgtttggaggaaaaagggggaggcttgcaagccgtaaaactccatcccaacagtgaagaacgggggtggcagcgtcatgttgttgggggtgctttgctgcaggagggactggtgcacttcacaagatagatggcatcatgaggaagaaaaattGTGGATATTGTTACGTTCGTCGATGGAAgaatcggaccaaggtgcagcgaggtaggcgtacattttaaattattaaatgaacactgaaaaaacaccaaaactAAACTTAACGTCTAGTAGGGATAAACAGCACAGTACCAAAAACAGGATCCCACAAactacaggtggaaaaaggctgcctaagtatgatccccaatcagaacCATaaccggccaacaaagaaatagaaaacatagattgctcaccctagtcacaccctgacctaaccaaatagagaattaacttcttgatgcacccatcccgttagcgggatcattttcatcaacatccgctgaattgcagagcgccaaattcaaattaaattactaaaaattatttaatttcatgaaatcacaagtgcaatatagcaaaacacagcttagcttgttgttaaccacctggcgtgtcagatttaaaaaaaaacttttggcgAAAGTCTACcgagcgtttatgtaaggacatctctctcagcagacaaaacattacaaacagctagcagccaagtagattggtcacaaaagtcagaaaagcaataaaatgaattgcttacttttgatgatcttcggatgtttgcactcacgagactcccagttacacactaaatgttccttttgtttgataaagataatttttatatccaaaaacctcaatttggttggcgcgttatgttcagaaatcaacAGGCTCGAGCGATCACGaccgggcagacgaaaattccaaattgtaAACACTGCTGGCATCCAGCCATCCAATGCAGCGATgcgatctttctcgctcatttttcaaaataaaagcctgaaaataTGTCTAAAGACTTTTCACACCATGTGTAAGtcataggaaaatgaatctggttgatatccctttaaatggagggaaggcatgcaatggaacagggagctttcaaaataagaggcaatatcagttatgttatactcacagacaatattttgagagttttgga

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU801722 True 2833 lncRNA 0.40 2 38226612 38230493

Neighbor

gene id symbol gene type direction distance location
LOC110531088 NA coding downstream 294649 37930118 ~ 37931963 (-)
LOC110530911 parp1 coding downstream 305201 37905170 ~ 37921411 (-)
LOC110530910 LOC106571760 coding downstream 346734 37859257 ~ 37879878 (-)
acbd3 LOC106571761 coding downstream 374768 37817872 ~ 37851844 (-)
sod2 sod2 coding downstream 433884 37782174 ~ 37792728 (-)
LOC100136309 LOC100136309 coding upstream 54410 38284903 ~ 38302289 (-)
LOC110529893 LOC106571757 coding upstream 100200 38330693 ~ 38387308 (-)
trnal-uaa-3 NA coding upstream 209705 38440198 ~ 38440280 (-)
LOC110530913 NA coding upstream 557020 38787513 ~ 38801952 (-)
LOC118965515 NA coding upstream 591649 38822129 ~ 38826089 (-)
G704730 NA non-coding downstream 146993 38079402 ~ 38079619 (-)
G704727 NA non-coding downstream 150111 38076265 ~ 38076501 (-)
G704712 NA non-coding downstream 170813 38055577 ~ 38055799 (-)
G704703 NA non-coding downstream 187363 38039023 ~ 38039249 (-)
G704701 NA non-coding downstream 189893 38036357 ~ 38036719 (-)
G704855 NA non-coding upstream 50218 38280711 ~ 38281009 (-)
G704862 NA non-coding upstream 65294 38295787 ~ 38296061 (-)
G704877 NA non-coding upstream 85213 38315706 ~ 38316015 (-)
G705135 NA non-coding upstream 426876 38657369 ~ 38657680 (-)
G705145 NA non-coding upstream 434997 38665490 ~ 38665706 (-)
G704702 NA other downstream 188266 38037725 ~ 38038346 (-)
LOC110530908 otof other downstream 734455 37474229 ~ 37626960 (-)
LOC110529880 LOC106571768 other downstream 865019 37355096 ~ 37361922 (-)
G701618 LOC106571560 other downstream 2308437 35900623 ~ 35918175 (-)
LOC110529865 LOC106571568 other downstream 2521299 35633473 ~ 35705333 (-)
G704874 NA other upstream 82996 38313489 ~ 38313803 (-)
G706683 stxbp5 other upstream 989151 39219644 ~ 39226313 (-)
slc22a16 LOC106571810 other upstream 1726468 39956961 ~ 40017167 (-)
G709272 NA other upstream 4489278 42719771 ~ 42720699 (-)
G709454 NA other upstream 4940267 43170760 ~ 43171082 (-)

Expression


Co-expression Network