G705348


Basic Information

Item Value
gene id G705348
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 38808385 ~ 38808987 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU802285
aatgaccagcagaaccgcaatagagacagaggcggttggtgattctccgttccctctccttagtcgagatgcggatacctcccagctgcataggctcagctcccgagccggcagaggaagatggtagtgatgcggagaggggggcaacggagaacgcgagctcctttccacgagctcggtgacgaagatcaacccgtcgctcaatgcgaatagcgagttcaatcaaggaatccacgctggaaggaacctcccgggagagaatctcatcctttacctctgcgcggagaccctccagaagacgagcgagcaaagccggctcgttccagccactggaggcagcaagagtgcgaaactcaatagagtagtctgttatggattgattgccttgacatagggaagacagggccctggaagcctcctccccaaaaacagatcgatcaaaaacccgtatcatctcctccttaaagtcctgatactggttagtacactcagcccttgcctcccagattgccgtgccccactcacgagcccgtccagtaaggagagatatgacgtaggcgacacgagcagtgctcctggcgtaagtgttgggctggagagaaa

Function

NR:

description
Retrotransposon-derived protein PEG10

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU802285 True 603 lncRNA 0.55 1 38808385 38808987

Neighbor

gene id symbol gene type direction distance location
LOC110530912 LOC106571754 coding upstream 166787 38472193 ~ 38641598 (+)
LOC118965514 NA coding upstream 340537 38463535 ~ 38467848 (+)
LOC110529891 LOC106571759 coding upstream 669300 38093831 ~ 38139085 (+)
LOC110529887 wtap coding upstream 1007350 37793008 ~ 37801035 (+)
grm1a LOC106607995 coding downstream 31009 38839996 ~ 38896580 (+)
LOC110529894 LOC106571778 coding downstream 87860 38896847 ~ 38923455 (+)
adgb adgb coding downstream 120469 38929456 ~ 39047229 (+)
stxbp5a stxbp5 coding downstream 261478 39070465 ~ 39235478 (+)
LOC110529897 NA coding downstream 428078 39152161 ~ 39239854 (+)
G705347 NA non-coding upstream 232 38807947 ~ 38808153 (+)
G705332 NA non-coding upstream 14207 38793842 ~ 38794178 (+)
G705330 NA non-coding upstream 16794 38791296 ~ 38791591 (+)
G705323 NA non-coding upstream 21600 38786548 ~ 38786785 (+)
G705255 NA non-coding upstream 65637 38742455 ~ 38742748 (+)
G705369 NA non-coding downstream 13141 38822128 ~ 38822853 (+)
G705438 NA non-coding downstream 110293 38919280 ~ 38921527 (+)
G705806 NA non-coding downstream 521533 39330520 ~ 39388526 (+)
G705875 NA non-coding downstream 630961 39439948 ~ 39440159 (+)
G705273 LOC100136012 other upstream 52080 38755871 ~ 38756305 (+)
G704281 NA other upstream 578411 38226055 ~ 38229974 (+)
G703835 LOC106584613 other upstream 1036750 37770864 ~ 37771635 (+)
G702817 LOC106571770 other upstream 1558576 37248737 ~ 37249809 (+)
G702687 NA other upstream 1749162 37058345 ~ 37059223 (+)
G705853 NA other downstream 593961 39402948 ~ 39403296 (+)
G706274 NA other downstream 1288919 40097906 ~ 40102291 (+)
LOC110530920 LOC106571806 other downstream 1357221 40166174 ~ 40323818 (+)
G708034 NA other downstream 2277711 41086698 ~ 41167970 (+)

Expression


Co-expression Network