G705883


Basic Information

Item Value
gene id G705883
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 39447759 ~ 39448177 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU802847
GACTACTCTTTTTATTCACAcccacacaagacacacacacgcatagataACTTTTTACTTTCGACACAACTGTTTCATAGAGTGTTAGATGTCGAGTATCTCCCCAGATTGCTTAGTGACCATTCTCCTCTGGTATTATCAATCTCCATTCCTACCAAGGTAAATGGagcatatagatggagactaaatTCTACACTCCTAAAGCAACCTGAATTTTGTGCATTCATCAAAGAGCAGATCAATATTTTTACTTTGACAAACAAACCCTCTGCTCCTGACAGCTTCATTCTTTGGGACACATTGAAGGCCTATCTGAGGGGACAGATTATTTCCTATACTAAAGGGCTGAAGAGAAAACACGGTGCGGAACTGAGTGCCCTTGAATCTGAAATCTCCGAGCTAGAGAAAACCTACCAAAG

Function

NR:

description
reverse transcriptase, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU802847 True 419 lncRNA 0.41 1 39447759 39448177

Neighbor

gene id symbol gene type direction distance location
LOC110530918 samd5 coding upstream 187250 39259698 ~ 39260509 (+)
LOC110529897 NA coding upstream 207905 39152161 ~ 39239854 (+)
stxbp5a stxbp5 coding upstream 212281 39070465 ~ 39235478 (+)
adgb adgb coding upstream 400530 38929456 ~ 39047229 (+)
LOC110529894 LOC106571778 coding upstream 524304 38896847 ~ 38923455 (+)
LOC110529898 sash1 coding downstream 15148 39463325 ~ 39796219 (+)
usta ust coding downstream 352287 39800464 ~ 39953509 (+)
LOC110529903 LOC106571809 coding downstream 585755 40033932 ~ 40128526 (+)
LOC110530920 LOC106571806 coding downstream 717997 40166174 ~ 40323818 (+)
LOC110529908 LOC106571835 coding downstream 973122 40421299 ~ 40424106 (+)
G705875 NA non-coding upstream 7600 39439948 ~ 39440159 (+)
G705806 NA non-coding upstream 59233 39330520 ~ 39388526 (+)
G705438 NA non-coding upstream 526232 38919280 ~ 38921527 (+)
G705369 NA non-coding upstream 624906 38822128 ~ 38822853 (+)
G705885 NA non-coding downstream 1225 39449402 ~ 39449601 (+)
G705887 NA non-coding downstream 5721 39453898 ~ 39454101 (+)
G705965 NA non-coding downstream 93013 39541190 ~ 39541726 (+)
G705966 NA non-coding downstream 94187 39542364 ~ 39542568 (+)
G705967 NA non-coding downstream 94468 39542645 ~ 39542925 (+)
G705853 NA other upstream 44463 39402948 ~ 39403296 (+)
G705273 LOC100136012 other upstream 691454 38755871 ~ 38756305 (+)
G704281 NA other upstream 1217785 38226055 ~ 38229974 (+)
G703835 LOC106584613 other upstream 1676124 37770864 ~ 37771635 (+)
G706274 NA other downstream 649729 40097906 ~ 40102291 (+)
G708034 NA other downstream 1638521 41086698 ~ 41167970 (+)
LOC110529918 LOC106571794 other downstream 1832661 41160943 ~ 41283719 (+)
G708448 NA other downstream 1931848 41380025 ~ 41384183 (+)

Expression


Co-expression Network