G705885


Basic Information

Item Value
gene id G705885
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 39449402 ~ 39449601 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU802849
ctatttctgtttcaatctctccctatccctgttCCCGCAGCATTTTTTTCCtctctcgacaagctgaccagaCGGTTTATCTGGCACGGCAAAACCCCTAGGGTTGGCCTGGATAAACTGACCCTTGATTACAGTCAAGGGGGCTTAAACCTCCCCAATTTTAGAATGTACTACTGGGCTGCACACTCTAGGTTTCTGGC

Function

NR:

description
WD repeat-containing protein 3 isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU802849 True 200 lncRNA 0.49 1 39449402 39449601

Neighbor

gene id symbol gene type direction distance location
LOC110530918 samd5 coding upstream 188893 39259698 ~ 39260509 (+)
LOC110529897 NA coding upstream 209548 39152161 ~ 39239854 (+)
stxbp5a stxbp5 coding upstream 213924 39070465 ~ 39235478 (+)
adgb adgb coding upstream 402173 38929456 ~ 39047229 (+)
LOC110529894 LOC106571778 coding upstream 525947 38896847 ~ 38923455 (+)
LOC110529898 sash1 coding downstream 13724 39463325 ~ 39796219 (+)
usta ust coding downstream 350863 39800464 ~ 39953509 (+)
LOC110529903 LOC106571809 coding downstream 584331 40033932 ~ 40128526 (+)
LOC110530920 LOC106571806 coding downstream 716573 40166174 ~ 40323818 (+)
LOC110529908 LOC106571835 coding downstream 971698 40421299 ~ 40424106 (+)
G705883 NA non-coding upstream 1225 39447759 ~ 39448177 (+)
G705875 NA non-coding upstream 9243 39439948 ~ 39440159 (+)
G705806 NA non-coding upstream 60876 39330520 ~ 39388526 (+)
G705438 NA non-coding upstream 527875 38919280 ~ 38921527 (+)
G705887 NA non-coding downstream 4297 39453898 ~ 39454101 (+)
G705965 NA non-coding downstream 91589 39541190 ~ 39541726 (+)
G705966 NA non-coding downstream 92763 39542364 ~ 39542568 (+)
G705967 NA non-coding downstream 93044 39542645 ~ 39542925 (+)
G705970 NA non-coding downstream 96216 39545817 ~ 39546115 (+)
G705853 NA other upstream 46106 39402948 ~ 39403296 (+)
G705273 LOC100136012 other upstream 693097 38755871 ~ 38756305 (+)
G704281 NA other upstream 1219428 38226055 ~ 38229974 (+)
G703835 LOC106584613 other upstream 1677767 37770864 ~ 37771635 (+)
G706274 NA other downstream 648305 40097906 ~ 40102291 (+)
G708034 NA other downstream 1637097 41086698 ~ 41167970 (+)
LOC110529918 LOC106571794 other downstream 1831237 41160943 ~ 41283719 (+)
G708448 NA other downstream 1930424 41380025 ~ 41384183 (+)

Expression


Co-expression Network