XLOC_026198


Basic Information

Item Value
gene id XLOC_026198
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007114.7
NCBI id CM002887.2
chromosome length 62628489
location 14301000 ~ 14317878 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00052974
GCTGCCATTGTAGATCCTCCTCCTTTCTGCTCTGATCCTCCTCTCATGCTCCCACTTTATTCTTCAcacCATGCAGCGGTCGCGATGGTTTCCTATGCGGTGGCCATAGCCTGCGTTTTCCATGGAGCTCCTGCGCGTCCCTCTCTCTTCCTTCTGTCCTTCCACCCACACTAGATATTTCTTGCGGAGCTTTTCCTCACATTAGCGCGTGCAGATGCGGATGCGCACTCGGTCTGTGTGCAAACCGCACTCTCACGCGCAGGCGGATCCCCGTTAATGAGGCGTGAGGGGTGAAATCGTCACTCCGCCGCAGCTCAGCCTCCGGTGCAGAAGCAGGAG

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00052974 True 339 lncRNA 0.57 2 14301000 14317878

Neighbor

gene id symbol gene type direction distance location
XLOC_026197 NA coding downstream 30045 14227057 ~ 14270955 (-)
XLOC_026194 NA coding downstream 101217 14160526 ~ 14199783 (-)
XLOC_026193 NA coding downstream 102643 14159537 ~ 14198357 (-)
XLOC_026195 NA coding downstream 116861 14170300 ~ 14184139 (-)
XLOC_026196 NA coding downstream 122064 14175962 ~ 14178936 (-)
XLOC_026199 elof1 coding upstream 178441 14496319 ~ 14498295 (-)
XLOC_026200 swsap1 coding upstream 247883 14565761 ~ 14571514 (-)
XLOC_026201 gadd45gip1 coding upstream 373434 14691312 ~ 14695033 (-)
XLOC_026202 NA coding upstream 420511 14738389 ~ 14738629 (-)
XLOC_026203 NA coding upstream 482784 14800662 ~ 14801964 (-)
XLOC_026204 NA non-coding upstream 555625 14873503 ~ 14875270 (-)
XLOC_026205 CR788308.1 non-coding upstream 570174 14888052 ~ 14888168 (-)
XLOC_026220 NA non-coding upstream 1300379 15618257 ~ 15625520 (-)

Expression


Co-expression Network