G705971


Basic Information

Item Value
gene id G705971
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 39546417 ~ 39546621 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU802937
TTATGAcacggggccgtgcattatcatgctgaaacattaggtgatggcggcggatgaatgtcacgacaatgggcctcaggatcttgtcacggtatctctgtgcattcaaattgccatcgataaaattcaATTGTgctcgttgtccgtagcttatgcctgcccataccataaccccaccgccaccatggggcactctgttcacaat

Function

NR:

description
Transposable element Tcb2 transposase

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU802937 True 205 lncRNA 0.49 1 39546417 39546621

Neighbor

gene id symbol gene type direction distance location
LOC110530918 samd5 coding upstream 285908 39259698 ~ 39260509 (+)
LOC110529897 NA coding upstream 306563 39152161 ~ 39239854 (+)
stxbp5a stxbp5 coding upstream 310939 39070465 ~ 39235478 (+)
adgb adgb coding upstream 499188 38929456 ~ 39047229 (+)
LOC110529894 LOC106571778 coding upstream 622962 38896847 ~ 38923455 (+)
usta ust coding downstream 253843 39800464 ~ 39953509 (+)
LOC110529903 LOC106571809 coding downstream 487311 40033932 ~ 40128526 (+)
LOC110530920 LOC106571806 coding downstream 619553 40166174 ~ 40323818 (+)
LOC110529908 LOC106571835 coding downstream 874678 40421299 ~ 40424106 (+)
cd164 LOC106571804 coding downstream 951419 40498040 ~ 40516785 (+)
G705970 NA non-coding upstream 302 39545817 ~ 39546115 (+)
G705967 NA non-coding upstream 3492 39542645 ~ 39542925 (+)
G705966 NA non-coding upstream 3849 39542364 ~ 39542568 (+)
G705965 NA non-coding upstream 4691 39541190 ~ 39541726 (+)
G705887 NA non-coding upstream 92316 39453898 ~ 39454101 (+)
G705980 NA non-coding downstream 10937 39557558 ~ 39557765 (+)
G705986 NA non-coding downstream 18143 39564764 ~ 39565053 (+)
G705991 NA non-coding downstream 23200 39569821 ~ 39570104 (+)
G706006 NA non-coding downstream 42865 39589486 ~ 39589685 (+)
G706007 NA non-coding downstream 43100 39589721 ~ 39590017 (+)
G705853 NA other upstream 143121 39402948 ~ 39403296 (+)
G705273 LOC100136012 other upstream 790112 38755871 ~ 38756305 (+)
G704281 NA other upstream 1316443 38226055 ~ 38229974 (+)
G703835 LOC106584613 other upstream 1774782 37770864 ~ 37771635 (+)
G706274 NA other downstream 551285 40097906 ~ 40102291 (+)
G708034 NA other downstream 1540077 41086698 ~ 41167970 (+)
LOC110529918 LOC106571794 other downstream 1734217 41160943 ~ 41283719 (+)
G708448 NA other downstream 1833404 41380025 ~ 41384183 (+)

Expression


Co-expression Network