G705980


Basic Information

Item Value
gene id G705980
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 39557558 ~ 39557765 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU802946
actcacacctgtgttaacgagagaatcactgatatgatgtcagctggtccttttgtggcagggctgaaatgcagtggacatgttttttggggattcagttcatttgcatggcaaagagggacttttcaattaattgcaattcatctgatcactcttcataacattctggagtatatgtaaattgtcatcatacaaactgaggctgcag

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU802946 True 208 lncRNA 0.40 1 39557558 39557765

Neighbor

gene id symbol gene type direction distance location
LOC110530918 samd5 coding upstream 297049 39259698 ~ 39260509 (+)
LOC110529897 NA coding upstream 317704 39152161 ~ 39239854 (+)
stxbp5a stxbp5 coding upstream 322080 39070465 ~ 39235478 (+)
adgb adgb coding upstream 510329 38929456 ~ 39047229 (+)
LOC110529894 LOC106571778 coding upstream 634103 38896847 ~ 38923455 (+)
usta ust coding downstream 242699 39800464 ~ 39953509 (+)
LOC110529903 LOC106571809 coding downstream 476167 40033932 ~ 40128526 (+)
LOC110530920 LOC106571806 coding downstream 608409 40166174 ~ 40323818 (+)
LOC110529908 LOC106571835 coding downstream 863534 40421299 ~ 40424106 (+)
cd164 LOC106571804 coding downstream 940275 40498040 ~ 40516785 (+)
G705971 NA non-coding upstream 10937 39546417 ~ 39546621 (+)
G705970 NA non-coding upstream 11443 39545817 ~ 39546115 (+)
G705967 NA non-coding upstream 14633 39542645 ~ 39542925 (+)
G705966 NA non-coding upstream 14990 39542364 ~ 39542568 (+)
G705965 NA non-coding upstream 15832 39541190 ~ 39541726 (+)
G705986 NA non-coding downstream 6999 39564764 ~ 39565053 (+)
G705991 NA non-coding downstream 12056 39569821 ~ 39570104 (+)
G706006 NA non-coding downstream 31721 39589486 ~ 39589685 (+)
G706007 NA non-coding downstream 31956 39589721 ~ 39590017 (+)
G706012 NA non-coding downstream 37937 39595702 ~ 39595939 (+)
G705853 NA other upstream 154262 39402948 ~ 39403296 (+)
G705273 LOC100136012 other upstream 801253 38755871 ~ 38756305 (+)
G704281 NA other upstream 1327584 38226055 ~ 38229974 (+)
G703835 LOC106584613 other upstream 1785923 37770864 ~ 37771635 (+)
G706274 NA other downstream 540141 40097906 ~ 40102291 (+)
G708034 NA other downstream 1528933 41086698 ~ 41167970 (+)
LOC110529918 LOC106571794 other downstream 1723073 41160943 ~ 41283719 (+)
G708448 NA other downstream 1822260 41380025 ~ 41384183 (+)

Expression


Co-expression Network