G706012


Basic Information

Item Value
gene id G706012
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 39595702 ~ 39595939 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU802978
GCTCCTGGGAGTGGCAGAGAGGCTGGATGCGGAGAGCGGAGAGGAATGCAGGATTCATCCTCAGAATACCTCTTGATTGTGGCCCGTTGGTCCCGATCCAGTTTAGGACCAAAACCTTATTgcctgtaaaaaaaaattaaaaacatgttTGTCCCTGCAGTGTTTGATATGATTAATCTGTTTATGGACATGATGATACCCAGCCTTTTATGTTCCTACAATTGATACTGTGTGACAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU802978 True 238 lncRNA 0.44 1 39595702 39595939

Neighbor

gene id symbol gene type direction distance location
LOC110530918 samd5 coding upstream 335193 39259698 ~ 39260509 (+)
LOC110529897 NA coding upstream 355848 39152161 ~ 39239854 (+)
stxbp5a stxbp5 coding upstream 360224 39070465 ~ 39235478 (+)
adgb adgb coding upstream 548473 38929456 ~ 39047229 (+)
LOC110529894 LOC106571778 coding upstream 672247 38896847 ~ 38923455 (+)
usta ust coding downstream 204525 39800464 ~ 39953509 (+)
LOC110529903 LOC106571809 coding downstream 437993 40033932 ~ 40128526 (+)
LOC110530920 LOC106571806 coding downstream 570235 40166174 ~ 40323818 (+)
LOC110529908 LOC106571835 coding downstream 825360 40421299 ~ 40424106 (+)
cd164 LOC106571804 coding downstream 902101 40498040 ~ 40516785 (+)
G706007 NA non-coding upstream 5685 39589721 ~ 39590017 (+)
G706006 NA non-coding upstream 6017 39589486 ~ 39589685 (+)
G705991 NA non-coding upstream 25598 39569821 ~ 39570104 (+)
G705986 NA non-coding upstream 30649 39564764 ~ 39565053 (+)
G705980 NA non-coding upstream 37937 39557558 ~ 39557765 (+)
G706015 NA non-coding downstream 2398 39598337 ~ 39598596 (+)
G706023 NA non-coding downstream 11718 39607657 ~ 39607869 (+)
G706024 NA non-coding downstream 12239 39608178 ~ 39608408 (+)
G706035 NA non-coding downstream 26903 39622842 ~ 39623075 (+)
G706039 NA non-coding downstream 30375 39626314 ~ 39626516 (+)
G705853 NA other upstream 192406 39402948 ~ 39403296 (+)
G705273 LOC100136012 other upstream 839397 38755871 ~ 38756305 (+)
G704281 NA other upstream 1365728 38226055 ~ 38229974 (+)
G703835 LOC106584613 other upstream 1824067 37770864 ~ 37771635 (+)
G706274 NA other downstream 501967 40097906 ~ 40102291 (+)
G708034 NA other downstream 1490759 41086698 ~ 41167970 (+)
LOC110529918 LOC106571794 other downstream 1684899 41160943 ~ 41283719 (+)
G708448 NA other downstream 1784086 41380025 ~ 41384183 (+)

Expression


Co-expression Network