G706156


Basic Information

Item Value
gene id G706156
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 39911563 ~ 39912043 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU803131
cttgaaatacagctgaagtaacatagctagctaactatttaactgtatgcctatggatgtgtagctagctacagtatgtagccgatctatgtatggaccctaaaacgttaggttctgaactaatattcataccaatctatgaacctcggctatcatagttgttgtatcaacttcaagtctgaatggcattaatgaagcctatggatagagtagaatataataactttattgtgccaaggatgcaagtcctatatacagtagttattaccatgcatgagattcccacattgtagcctgtacatgtACTCTTCCTTAGCAACTAAAGGTGCGGTTCAGGTGTGAATCTCTGagacattatttttcagtcatatcaaactccattatttgaatgatgctgtgtctgcatgtatgtattgcaattatacacttcaacagtgtttaccactcctgttcctgggacatcaatgattacacattgtga

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU803131 True 481 lncRNA 0.37 1 39911563 39912043

Neighbor

gene id symbol gene type direction distance location
LOC110529898 sash1 coding upstream 115344 39463325 ~ 39796219 (+)
LOC110530918 samd5 coding upstream 651054 39259698 ~ 39260509 (+)
LOC110529897 NA coding upstream 671709 39152161 ~ 39239854 (+)
stxbp5a stxbp5 coding upstream 676085 39070465 ~ 39235478 (+)
adgb adgb coding upstream 864334 38929456 ~ 39047229 (+)
LOC110529903 LOC106571809 coding downstream 121889 40033932 ~ 40128526 (+)
LOC110530920 LOC106571806 coding downstream 254131 40166174 ~ 40323818 (+)
LOC110529908 LOC106571835 coding downstream 509256 40421299 ~ 40424106 (+)
cd164 LOC106571804 coding downstream 585997 40498040 ~ 40516785 (+)
LOC110529910 LOC106571802 coding downstream 721185 40633228 ~ 40639520 (+)
G706154 NA non-coding upstream 8558 39902845 ~ 39903005 (+)
G706150 NA non-coding upstream 22121 39889194 ~ 39889442 (+)
G706123 NA non-coding upstream 72109 39838212 ~ 39839454 (+)
G706108 NA non-coding upstream 158796 39752246 ~ 39752767 (+)
G706039 NA non-coding upstream 285047 39626314 ~ 39626516 (+)
G706169 NA non-coding downstream 21665 39933708 ~ 39999518 (+)
usta ust non-coding downstream 40413 39800464 ~ 39953509 (+)
G706217 NA non-coding downstream 110522 40022565 ~ 40022772 (+)
G706220 NA non-coding downstream 114188 40026231 ~ 40026492 (+)
G706227 NA non-coding downstream 119891 40031934 ~ 40032216 (+)
G705853 NA other upstream 508267 39402948 ~ 39403296 (+)
G705273 LOC100136012 other upstream 1155258 38755871 ~ 38756305 (+)
G704281 NA other upstream 1681589 38226055 ~ 38229974 (+)
G703835 LOC106584613 other upstream 2139928 37770864 ~ 37771635 (+)
G706274 NA other downstream 185863 40097906 ~ 40102291 (+)
G708034 NA other downstream 1174655 41086698 ~ 41167970 (+)
LOC110529918 LOC106571794 other downstream 1368795 41160943 ~ 41283719 (+)
G708448 NA other downstream 1467982 41380025 ~ 41384183 (+)

Expression


Co-expression Network