G706169


Basic Information

Item Value
gene id G706169
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 39933708 ~ 39999518 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU803145
cttcatgttacacaatacatgtatgttttgtttgataaagttcatatttatataaatctcagtatacattggtgcgttacgttcactagttccaaaaacatcctgtgatattgcagagagccacatcattttacagaaatactcattataaatgtcgataaatgccggggcggcagggtacccTAGTGGTTGGGCTAgtagcgttgggctagtaaccggaaggttgcaagttcaaactcccgagctgacaaggtacaaatctgtcattctgcccctgaacaggca

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU803145 True 285 lncRNA 0.41 2 39933708 39999518

Neighbor

gene id symbol gene type direction distance location
LOC110529898 sash1 coding upstream 137489 39463325 ~ 39796219 (+)
LOC110530918 samd5 coding upstream 673199 39259698 ~ 39260509 (+)
LOC110529897 NA coding upstream 693854 39152161 ~ 39239854 (+)
stxbp5a stxbp5 coding upstream 698230 39070465 ~ 39235478 (+)
adgb adgb coding upstream 886479 38929456 ~ 39047229 (+)
LOC110529903 LOC106571809 coding downstream 34414 40033932 ~ 40128526 (+)
LOC110530920 LOC106571806 coding downstream 166656 40166174 ~ 40323818 (+)
LOC110529908 LOC106571835 coding downstream 421781 40421299 ~ 40424106 (+)
cd164 LOC106571804 coding downstream 498522 40498040 ~ 40516785 (+)
LOC110529910 LOC106571802 coding downstream 633710 40633228 ~ 40639520 (+)
G706156 NA non-coding upstream 21665 39911563 ~ 39912043 (+)
G706154 NA non-coding upstream 30703 39902845 ~ 39903005 (+)
G706150 NA non-coding upstream 44266 39889194 ~ 39889442 (+)
G706123 NA non-coding upstream 94254 39838212 ~ 39839454 (+)
G706108 NA non-coding upstream 180941 39752246 ~ 39752767 (+)
G706217 NA non-coding downstream 23047 40022565 ~ 40022772 (+)
G706220 NA non-coding downstream 26713 40026231 ~ 40026492 (+)
G706227 NA non-coding downstream 32416 40031934 ~ 40032216 (+)
G706441 NA non-coding downstream 337190 40336708 ~ 40336919 (+)
G706443 NA non-coding downstream 343375 40342893 ~ 40343101 (+)
G705853 NA other upstream 530412 39402948 ~ 39403296 (+)
G705273 LOC100136012 other upstream 1177403 38755871 ~ 38756305 (+)
G704281 NA other upstream 1703734 38226055 ~ 38229974 (+)
G703835 LOC106584613 other upstream 2162073 37770864 ~ 37771635 (+)
G706274 NA other downstream 98388 40097906 ~ 40102291 (+)
G708034 NA other downstream 1087180 41086698 ~ 41167970 (+)
LOC110529918 LOC106571794 other downstream 1281320 41160943 ~ 41283719 (+)
G708448 NA other downstream 1380507 41380025 ~ 41384183 (+)

Expression


Co-expression Network