G706227


Basic Information

Item Value
gene id G706227
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 40031934 ~ 40032216 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU803203
gatgatgggtgctccctctgctgtttcctgaagtccaagatcatatcctttgttttgttgacgttgagtgagaggttattttcctgacaccacactcgagtgccctcacctcatccctgtaggccgtctcgtcgttgttggtaatcaagcccactactatTGTGTggtttgcaaacttgatgattgagttggaggtgttcatgtccacgcagtcatgggtgaacagggagtactggagggggctgagcacgcacccttgtggggccccagtgttgagggtcag

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU803203 True 283 lncRNA 0.52 1 40031934 40032216

Neighbor

gene id symbol gene type direction distance location
usta ust coding upstream 78425 39800464 ~ 39953509 (+)
LOC110529898 sash1 coding upstream 235715 39463325 ~ 39796219 (+)
LOC110530918 samd5 coding upstream 771425 39259698 ~ 39260509 (+)
LOC110529897 NA coding upstream 792080 39152161 ~ 39239854 (+)
stxbp5a stxbp5 coding upstream 796456 39070465 ~ 39235478 (+)
LOC110529903 LOC106571809 coding downstream 1716 40033932 ~ 40128526 (+)
LOC110530920 LOC106571806 coding downstream 133958 40166174 ~ 40323818 (+)
LOC110529908 LOC106571835 coding downstream 389083 40421299 ~ 40424106 (+)
cd164 LOC106571804 coding downstream 465824 40498040 ~ 40516785 (+)
LOC110529910 LOC106571802 coding downstream 601012 40633228 ~ 40639520 (+)
G706220 NA non-coding upstream 5442 40026231 ~ 40026492 (+)
G706217 NA non-coding upstream 9162 40022565 ~ 40022772 (+)
G706169 NA non-coding upstream 32416 39933708 ~ 39999518 (+)
G706156 NA non-coding upstream 119891 39911563 ~ 39912043 (+)
G706441 NA non-coding downstream 304492 40336708 ~ 40336919 (+)
G706443 NA non-coding downstream 310677 40342893 ~ 40343101 (+)
G706448 NA non-coding downstream 316052 40348268 ~ 40348486 (+)
G706452 NA non-coding downstream 321049 40353265 ~ 40353500 (+)
G706471 NA non-coding downstream 394199 40426415 ~ 40426652 (+)
G705853 NA other upstream 628638 39402948 ~ 39403296 (+)
adgb adgb other upstream 1030056 38929456 ~ 39047229 (+)
G705273 LOC100136012 other upstream 1275629 38755871 ~ 38756305 (+)
G704281 NA other upstream 1801960 38226055 ~ 38229974 (+)
G703835 LOC106584613 other upstream 2260299 37770864 ~ 37771635 (+)
G706274 NA other downstream 65690 40097906 ~ 40102291 (+)
G708034 NA other downstream 1054482 41086698 ~ 41167970 (+)
LOC110529918 LOC106571794 other downstream 1248622 41160943 ~ 41283719 (+)
G708448 NA other downstream 1347809 41380025 ~ 41384183 (+)

Expression


Co-expression Network