XLOC_026204


Basic Information

Item Value
gene id XLOC_026204
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007114.7
NCBI id CM002887.2
chromosome length 62628489
location 14873503 ~ 14875270 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00052976
ACGGGTAAGCGCGCACGGCATCGGAAGGAGCTCGAAAAGTATAAGGTAACTAATGAAACTTACGTGAAGCATGTTTGATGAccactttataaacacaacacctaggataatttaggagctttttattgtaataaaatgccttttgaatgacacagatttttatgttggctaggtgatgacagtaagtaacgtTACTGTGATTTGTGATCTTTCTGGGGTGTTAATTGTAAAGCAGTAAGTAGTATTTTTACTCTTGTATTTCTTAAGTTTGTTCATGGATTTTTGTGACAATACTTTGATGCATAAGTGTTGAATTCAGcttctaacaatgttttttttttaaaatcaaaatatatacaataattgtcctgctctgcatgtacattttgtttagctgtacatctgtacattgaatagcaaatgttattaatttactatgagcattttacattctagACGTGATTTGAGCTATCTTTAATTAATCCTGTATGTAAGGGTCGTTTCATGCTAACGGAAATGTCTGAGCTAAGGCTAATTCCAACCTAATCATCTtcgactgcaaaaagaaaaagtttgaccACCGTTTTATGTGACACcctggattattattattatttaggagtatttttgtgatatagtgacttttggctaacatgatctttttttacttaattttgcttaaacgcttttatctgttattctttttcagatggataattgcgtgaaaatcaaactaaaagaatgcaatcttgaggagttaatccccacatttgaaggtatgtaataatattttacttggttcattgtaatcattagggctgcccttgtctaaacatttgtctggttgacttgtgatgttcatttgaagcattagttgaataattacagatttattaataaaccatttattcattaattcattttctttttgactcagtccctttattaatctggggtcgccacagcggaatgaaccgccaacttatccagcatattttttacacagcggattcatgcagcatacattgactttgccagtgtggactttttttctgcaactagtgggtagcacattcgcctcatagcaacaaggtcacttgatcgatccttggctgggtcaataggcctttctgtgtggagtttgcatgttctccccgtgttcgcgtgggtttcctccaggtgccccggtttccaaagacgtggtaaaggtgaattaagtagactaaattgtcaatggtgtatgtgtgtgaatgagtatttgtttcccagtgatgggttgcagctgaaagggcattcgctgcataaaacttatgctggatatgttggtggttcattccattgtggttaccccagattaataaagcgacaaagctaaaaagaaaatgaatgaatgaataataaatttttagttgactaatggttattcaattattagggggcagccctagtaatcattagccacttcaacactttaaactgagagattgaactctaatgccaatttgtttttgtctggttattttttaaaatctgctgtTCATGCAACCAGTGACAtttctcttgttttatttttagcacagGAGCGAACCTTTCCTCGTTTTTAGGTCAATTTGAATACAATTCAGAGGGTAAGGATTCAATTAAAGGTTTCTCGATGcataatgatgcatttaatgcataatgattgtcttagttattttattaacaatgaaaatgttatttttatgtttgttattagggtggcatgggggcgcagtgggtagtgctg

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko03070 Bacterial secretion system
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00052976 True 1768 lncRNA 0.35 1 14873503 14875270

Neighbor

gene id symbol gene type direction distance location
XLOC_026203 NA coding downstream 71539 14800662 ~ 14801964 (-)
XLOC_026202 NA coding downstream 134874 14738389 ~ 14738629 (-)
XLOC_026201 gadd45gip1 coding downstream 178470 14691312 ~ 14695033 (-)
XLOC_026200 swsap1 coding downstream 301989 14565761 ~ 14571514 (-)
XLOC_026199 elof1 coding downstream 375208 14496319 ~ 14498295 (-)
XLOC_026205 CR788308.1 coding upstream 12782 14888052 ~ 14888168 (-)
XLOC_026206 nme4 coding upstream 193192 15068462 ~ 15082475 (-)
XLOC_026207 xpo6 coding upstream 210024 15085294 ~ 15119856 (-)
XLOC_026208 xpo6 coding upstream 255700 15130970 ~ 15131438 (-)
XLOC_026209 antkmt coding upstream 257359 15132629 ~ 15144182 (-)
XLOC_026198 NA non-coding downstream 555625 14301000 ~ 14317878 (-)
XLOC_026197 NA non-coding downstream 602548 14227057 ~ 14270955 (-)
XLOC_026195 NA non-coding downstream 689364 14170300 ~ 14184139 (-)
XLOC_026220 NA non-coding upstream 742987 15618257 ~ 15625520 (-)
XLOC_026221 NA non-coding upstream 751999 15627269 ~ 15635508 (-)
XLOC_026225 NA non-coding upstream 810514 15685784 ~ 15706767 (-)
XLOC_026233 NA non-coding upstream 1189603 16064873 ~ 16068537 (-)

Expression


Co-expression Network