G707455


Basic Information

Item Value
gene id G707455
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 40479931 ~ 40480280 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU804479
gtccagtacgccctgttcctcctccccgcactcgccctgaggtgcgtgtcctcggcccagtaccaccagtgctggcaccacgcaccaggcctacagtgcgcctcgccagtccagagcttccggcaacagtacccagtcgagagcgtccggctacagtagcCAGTCCAGAGTGTCCAGCTACAGTagccagtccagagcgtccggctacagtacccagtccagagtgtctggctacagtacccagtccagagcatccggcaacagtacccagtccagagcgtccggcaacagtacccagtccagagcgtctggcaacagtacccagtccagtgcgtctggcaacagtaccc

Function

NR:

description
PREDICTED: arabinogalactan protein 1-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU804479 True 350 lncRNA 0.63 1 40479931 40480280

Neighbor

gene id symbol gene type direction distance location
LOC110529908 LOC106571835 coding upstream 55825 40421299 ~ 40424106 (+)
LOC110530920 LOC106571806 coding upstream 156113 40166174 ~ 40323818 (+)
LOC110529903 LOC106571809 coding upstream 351405 40033932 ~ 40128526 (+)
usta ust coding upstream 526422 39800464 ~ 39953509 (+)
LOC110529898 sash1 coding upstream 683712 39463325 ~ 39796219 (+)
cd164 LOC106571804 coding downstream 17760 40498040 ~ 40516785 (+)
LOC110529910 LOC106571802 coding downstream 152948 40633228 ~ 40639520 (+)
LOC110529915 snx3 coding downstream 432663 40912943 ~ 40955393 (+)
LOC110529917 LOC106571796 coding downstream 571883 41052163 ~ 41056862 (+)
LOC110529918 LOC106571794 coding downstream 680663 41160943 ~ 41283719 (+)
G707454 NA non-coding upstream 259 40479469 ~ 40479672 (+)
G707453 NA non-coding upstream 577 40479138 ~ 40479354 (+)
G707444 NA non-coding upstream 11247 40468479 ~ 40468684 (+)
G706472 NA non-coding upstream 52344 40427212 ~ 40427587 (+)
G706471 NA non-coding upstream 53279 40426415 ~ 40426652 (+)
G707459 NA non-coding downstream 4560 40484840 ~ 40485118 (+)
G707460 NA non-coding downstream 5251 40485531 ~ 40485739 (+)
G707480 NA non-coding downstream 40653 40520933 ~ 40521152 (+)
G707481 NA non-coding downstream 42829 40523109 ~ 40523321 (+)
G707635 NA non-coding downstream 198718 40678998 ~ 40679245 (+)
G706274 NA other upstream 377640 40097906 ~ 40102291 (+)
G705853 NA other upstream 1076635 39402948 ~ 39403296 (+)
adgb adgb other upstream 1478053 38929456 ~ 39047229 (+)
G705273 LOC100136012 other upstream 1723626 38755871 ~ 38756305 (+)
G708034 NA other downstream 606418 41086698 ~ 41167970 (+)
G708448 NA other downstream 899745 41380025 ~ 41384183 (+)
G709490 NA other downstream 2716280 43196560 ~ 43197642 (+)
G711021 NA other downstream 3968304 44448584 ~ 44448973 (+)

Expression


Co-expression Network