G707917



Basic Information


Item Value
gene id G707917
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 40844292 ~ 40844519 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU804965
GAGGTAACTCAAGCAGGTGTTTTTGGACACAAGCTATGCAGTAGGTAACAAACAGAACAACTATGAACTGCACAAACTAATAAGATAGATTGGCAAATTCATCTGTGGAGTTTTATGTGCCATTTATTGGGGATGACGTAGACAGAATTGTCAGATCCTTCAAAACATTAACATCTCATTTATACTAATGAACAGGAGGTTATCATACGCAGGCTAATGGCTCTGAAG

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU804965 True 228 lncRNA 0.38 1 40844292 40844519

Neighbor


gene id symbol gene type direction distance location
LOC118965517 NA coding downstream 44255 40779851 ~ 40800037 (-)
LOC110529912 LOC106571799 coding downstream 64661 40724397 ~ 40779631 (-)
armc2 armc2 coding downstream 174791 40638271 ~ 40669501 (-)
LOC110530919 cdc40 coding downstream 679316 40132191 ~ 40164976 (-)
LOC110529916 LOC106571797 coding upstream 113623 40958142 ~ 40969478 (-)
LOC118965611 NA coding upstream 881002 41725469 ~ 41728987 (-)
klhl18 klhl18 coding upstream 1496163 42340682 ~ 42420087 (-)
puf60a puf60 coding upstream 1587272 42431791 ~ 42526586 (-)
mycb myc coding upstream 2755235 43599754 ~ 43602305 (-)
G707907 NA non-coding downstream 8161 40835899 ~ 40836131 (-)
G707905 yo84 non-coding downstream 11954 40831967 ~ 40832338 (-)
G707884 NA non-coding downstream 24962 40812788 ~ 40819330 (-)
G707817 NA non-coding downstream 126404 40716415 ~ 40717888 (-)
G707849 NA non-coding downstream 135891 40708042 ~ 40708401 (-)
G708154 NA non-coding upstream 30697 40875216 ~ 40910989 (-)
G708169 NA non-coding upstream 112374 40956893 ~ 40957480 (-)
G708214 NA non-coding upstream 125024 40969543 ~ 40969774 (-)
G708229 NA non-coding upstream 182082 41026601 ~ 41039666 (-)
G708363 NA non-coding upstream 397022 41241541 ~ 41241912 (-)
slc22a16 LOC106571810 other downstream 884679 39956961 ~ 40017167 (-)
G706683 stxbp5 other downstream 1617979 39219644 ~ 39226313 (-)
G704874 NA other downstream 2530489 38313489 ~ 38313803 (-)
G704702 NA other downstream 2805946 38037725 ~ 38038346 (-)
LOC110530908 otof other downstream 3352135 37474229 ~ 37626960 (-)
G709272 NA other upstream 1875252 42719771 ~ 42720699 (-)
G709454 NA other upstream 2326241 43170760 ~ 43171082 (-)
G711133 NA other upstream 3694274 44538793 ~ 44539504 (-)
G712814 NA other upstream 4613258 45457777 ~ 45458248 (-)
crfb16 LOC106568648 other upstream 5466611 46309732 ~ 46325685 (-)

Expression



Co-expression Network