G708444


Basic Information

Item Value
gene id G708444
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 41360407 ~ 41381964 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU805559
agacagggcaggacaagtcaaggcaggacaagacagggcaggacaagacaagaaaggacaagacaggacaagacagggcaggacaggacaagacagggcaggacaagacaggacaagacaaggcaggacaagacagggcaggacaagacagggcaagacaggacaggacaagacagggcaggacaagacaggacaagacagggcaggacaagacaggacaggacaagacagggcaggacaagacagggcaggacaagacagggcaggacaagacagggcaggacaagacaaggcaggacaagacagggcaggacaagacaaggcaggacaagacaggacaagacaagacaggacaggacaggacaagacagggcagggcagggcagggcaggacaggacaagacagggcaggacaagacaagacaggacaagacagggcaggacaagacagggcaggacaaggcagggcaggacaagacaagacaggacaagacaggacaagacagggcaggacaagacagggcaggacaagacagggcaggacaagacagggcaggacaggacaagacagggcaggacaagacagggcaggacaagacaagacaggacaaggcagggcaggacaagacaaggcagggcaggacagggcaggacaggacaaggcagggcaggacaagac

Function

NR:

description
PREDICTED: transcription activator BRG1-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU805559 True 679 lncRNA 0.58 3 41360407 41381964

Neighbor

gene id symbol gene type direction distance location
LOC110529918 LOC106571794 coding upstream 76688 41160943 ~ 41283719 (+)
LOC110529917 LOC106571796 coding upstream 303545 41052163 ~ 41056862 (+)
LOC110529915 snx3 coding upstream 405014 40912943 ~ 40955393 (+)
LOC110529910 LOC106571802 coding upstream 720887 40633228 ~ 40639520 (+)
cd164 LOC106571804 coding upstream 843622 40498040 ~ 40516785 (+)
LOC118965612 NA coding downstream 583951 41965915 ~ 41972820 (+)
tmub1 LOC106568619 coding downstream 1153297 42535261 ~ 42549691 (+)
LOC110530921 asap1 coding downstream 1190495 42572459 ~ 42606605 (+)
fam49ba LOC106592588 coding downstream 1264296 42646260 ~ 42699086 (+)
ankhb ankh coding downstream 2277779 43659743 ~ 43747606 (+)
G708433 NA non-coding upstream 443 41338554 ~ 41359964 (+)
G708432 NA non-coding upstream 11139 41336794 ~ 41349268 (+)
G708431 NA non-coding upstream 21940 41330407 ~ 41338467 (+)
G708142 NA non-coding upstream 86890 41273289 ~ 41273517 (+)
G708141 NA non-coding upstream 87670 41272504 ~ 41272737 (+)
G708456 NA non-coding downstream 4878 41386842 ~ 41387077 (+)
G708457 NA non-coding downstream 10058 41392022 ~ 41392373 (+)
G708459 NA non-coding downstream 10848 41392812 ~ 41393425 (+)
G708464 NA non-coding downstream 13861 41395825 ~ 41403542 (+)
G708466 NA non-coding downstream 21605 41403569 ~ 41405337 (+)
G708034 NA other upstream 192437 41086698 ~ 41167970 (+)
LOC110530920 LOC106571806 other upstream 1036634 40166174 ~ 40323818 (+)
G706274 NA other upstream 1258116 40097906 ~ 40102291 (+)
G705853 NA other upstream 1957111 39402948 ~ 39403296 (+)
G709490 NA other downstream 1814596 43196560 ~ 43197642 (+)
G711021 NA other downstream 3066620 44448584 ~ 44448973 (+)
G711845 NA other downstream 4264893 45646857 ~ 45647377 (+)
G711912 NA other downstream 4411305 45793269 ~ 45794549 (+)
G713405 NA other downstream 5083434 46465398 ~ 46466227 (+)

Expression


Co-expression Network