G708462


Basic Information

Item Value
gene id G708462
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 41411754 ~ 41488746 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU805587
gggacaacccttcagttcactactgtacctatcaattatccagtagtagtgattatggttcctcaatatacatttaacatattaccgcttaggctatgtgttacagcactacttttggtgttttttcaggaattgctcttgagaaaatgtcatgtaattgtccccttcaaagttgatatcagattttagcccctgctagggcagatggcacacagacagcagaactggggacagatatgcagggacagactggcagagacagggagtctcaggtaagtttgttgcaccccatatacagtcagtgtacagtaccattgccacctactgtccagtatgtatgcaggtatatgtactacaaccagcaataccaagaaaggctggttgtatgtagcacatatacctgcacacatactggactgaaaaggaacactgctttaactattattagtagtagtattataatgatttgaacaagttgggacaacccttcagttaactactgtacctatcaattatccagtagtagtgattatggttcctcaatatacatttaacatatttcagcactacttttggtgttttttcaggaattgctcttgagaaaatgtcatgtaattgtccccttcaaagttgatatccgattttagcccctgctagggcagatggcacacagacagcagaactggggacagatatgcagggacagactggtagagacagggagtctcaggtaactttgttgcaccccatatacagtcagtgtacagtaccattgccacctacatgtactacaaccagcaataccaagaaaggctggttgtatgtagcacatatacctgcacacatactggactgataaggaacactgctttaactattattagtagtagtattataatgatttgaacaagttgggacaacccttcagttaactactgtacctatcaattatccagtagtagtgattatggttcctcaatatacatttaacatattaccgcttaggctatgtgttacagcactacttttggtgttttttcaggaattgctcttgagaaaatgtaaagtaattgtcccttctaagttgatatcagattttagcccatgctagggcagatggcacacagacagcagaactggggacagatatgcagggacagactggcagagacagggagtctcaggtaagtttgttgcaccccatatacagtcagtgtacagtaccattgccacttactgtccagtatgtatgcaggtatatgtactataaccagcaataccaagaaaggctggttgtaagcacatatacctgcacacatactggactgataaggaacactgctttaactattattagtagtagtattataatgatttgaacaagttgggacaacccttcagttaacta

Function

NR:

description
PREDICTED: basic immunoglobulin-like variable motif-containing protein isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU805587 True 1408 lncRNA 0.40 2 41411754 41488746

Neighbor

gene id symbol gene type direction distance location
LOC110529918 LOC106571794 coding upstream 128035 41160943 ~ 41283719 (+)
LOC110529917 LOC106571796 coding upstream 354892 41052163 ~ 41056862 (+)
LOC110529915 snx3 coding upstream 456361 40912943 ~ 40955393 (+)
LOC110529910 LOC106571802 coding upstream 772234 40633228 ~ 40639520 (+)
cd164 LOC106571804 coding upstream 894969 40498040 ~ 40516785 (+)
LOC118965612 NA coding downstream 477169 41965915 ~ 41972820 (+)
tmub1 LOC106568619 coding downstream 1046515 42535261 ~ 42549691 (+)
LOC110530921 asap1 coding downstream 1083713 42572459 ~ 42606605 (+)
fam49ba LOC106592588 coding downstream 1157514 42646260 ~ 42699086 (+)
ankhb ankh coding downstream 2170997 43659743 ~ 43747606 (+)
G708466 NA non-coding upstream 6417 41403569 ~ 41405337 (+)
G708464 NA non-coding upstream 8212 41395825 ~ 41403542 (+)
G708459 NA non-coding upstream 18329 41392812 ~ 41393425 (+)
G708457 NA non-coding upstream 19381 41392022 ~ 41392373 (+)
G708456 NA non-coding upstream 24677 41386842 ~ 41387077 (+)
G708486 NA non-coding downstream 32737 41521483 ~ 41552328 (+)
G708520 NA non-coding downstream 48425 41537171 ~ 41546180 (+)
G708502 NA non-coding downstream 64903 41553649 ~ 41554942 (+)
G708493 NA non-coding downstream 72528 41561274 ~ 41563000 (+)
G708485 NA non-coding downstream 117838 41606584 ~ 41678066 (+)
G708448 NA other upstream 27571 41380025 ~ 41384183 (+)
G708034 NA other upstream 243784 41086698 ~ 41167970 (+)
LOC110530920 LOC106571806 other upstream 1087981 40166174 ~ 40323818 (+)
G706274 NA other upstream 1309463 40097906 ~ 40102291 (+)
G709490 NA other downstream 1707814 43196560 ~ 43197642 (+)
G711021 NA other downstream 2959838 44448584 ~ 44448973 (+)
G711845 NA other downstream 4158111 45646857 ~ 45647377 (+)
G711912 NA other downstream 4304523 45793269 ~ 45794549 (+)
G713405 NA other downstream 4976652 46465398 ~ 46466227 (+)

Expression


Co-expression Network