G708684


Basic Information

Item Value
gene id G708684
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 41484407 ~ 41492020 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU805893
atattgaggaaccataatcactactactggataattgataggtacagtagttaactgaagggttgtcccaacttgttcaaatcattataatactactactaataatagttaaagcagtgttccttatcagtccagtatgtgtgcaggtatatgtgcttacaaccagcctttcttggtattgctggttgtagtacatatacctgcatacatactggacagtaggtggcaatggtactgtacactgactgtatatggggtgcaacaaacttacctgagactccctgtctctaccagtctgtccctgcatatctgtccccagttctgctgtctgtgtgccatctgccctagcaggggctaaaatctgatatcaacttttaaggggacaattacattacattttttcaagagcaattcctgaaaaaacaccaaaagtagtgctgtaacacatagcctaagcggtaatatgttaaatgtatattgaggaaccataatcactactactggataattgataggtacagtagtgaactgaagggttgtcccaacttgttcaaatcattataatactactactaataatagttaaaagcagtgttccttatcagtccagtctgtgtgcaggtatatgtgctacatacaaccagcctttcttggtattgctggttgtagtacatgtaggtggcaatggtactgtacactgactgtatatgggg
>TU805892
atattgaggaaccataatcactactactggataattgataggtacagtagttaactgaagggttgtcccaacttgttcaaatcattataatactactactaataatagttaaagcagtgttccttatcagtccagtatgtgtgcaggtatatgtgcttacaaccagcctttcttggtattgctggttgtagtacatatacctgcatacatactggacagtaggtggcaatggtactgtacactgactgtatatggggtgcaacaaacttacctgagactccctgtctctaccagtctgtccctgcatatctgtccccagttctgctgtctgtgtgccatctgccctagcaggggctaaaatctgatatcaacttttaaggggacaattacattacattttttcaagagcaattcctgaaaaaacaccaaaagtagtgctgtaacacatagcctaagcggtaatatgttaaatgtatattgaggaaccataatcactactactggataattgataggtacagtagtgaactgaagggttgtcccaacttgttcaaatcattataatactactactaataatagttaaaagcagtgttccttatcagtccagtctgtgtgcaggtatatgtgcttacaaccagcctttcttggtattgctggttgtagtacatatacctgcatacataccggacagtaggtggcaatggtactgtacactgactgtatatggggtgcaacaaacttacctgagactccctgtctctaccagtc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU805893 False 713 lncRNA 0.39 2 41484407 41492020
TU805892 True 771 lncRNA 0.40 2 41489424 41492020

Neighbor

gene id symbol gene type direction distance location
LOC110529916 LOC106571797 coding downstream 514929 40958142 ~ 40969478 (-)
LOC118965517 NA coding downstream 684370 40779851 ~ 40800037 (-)
LOC110529912 LOC106571799 coding downstream 704776 40724397 ~ 40779631 (-)
armc2 armc2 coding downstream 814906 40638271 ~ 40669501 (-)
LOC118965516 LOC106588149 coding downstream 1339214 40143911 ~ 40145193 (-)
LOC118965611 NA coding upstream 233501 41725469 ~ 41728987 (-)
klhl18 klhl18 coding upstream 848662 42340682 ~ 42420087 (-)
puf60a puf60 coding upstream 939771 42431791 ~ 42526586 (-)
mycb myc coding upstream 2107734 43599754 ~ 43602305 (-)
LOC118965613 NA coding upstream 2267309 43759329 ~ 43763318 (-)
G708654 NA non-coding downstream 710 41464211 ~ 41483697 (-)
G708655 NA non-coding downstream 10417 41404736 ~ 41473990 (-)
G708656 NA non-coding downstream 71021 41405629 ~ 41413386 (-)
G708652 NA non-coding downstream 88194 41394936 ~ 41396213 (-)
G708460 NA non-coding downstream 90976 41393002 ~ 41393431 (-)
G708690 NA non-coding upstream 29466 41521486 ~ 41551177 (-)
G708707 NA non-coding upstream 128060 41620080 ~ 41640055 (-)
G708715 NA non-coding upstream 184757 41676777 ~ 41680717 (-)
G708716 NA non-coding upstream 186166 41678186 ~ 41681998 (-)
G708729 NA non-coding upstream 213684 41705704 ~ 41722567 (-)
slc22a16 LOC106571810 other downstream 1524794 39956961 ~ 40017167 (-)
G706683 stxbp5 other downstream 2258094 39219644 ~ 39226313 (-)
G704874 NA other downstream 3170604 38313489 ~ 38313803 (-)
G704702 NA other downstream 3446061 38037725 ~ 38038346 (-)
LOC110530908 otof other downstream 3992250 37474229 ~ 37626960 (-)
G709272 NA other upstream 1227751 42719771 ~ 42720699 (-)
G709454 NA other upstream 1678740 43170760 ~ 43171082 (-)
G711133 NA other upstream 3046773 44538793 ~ 44539504 (-)
G712814 NA other upstream 3965757 45457777 ~ 45458248 (-)
crfb16 LOC106568648 other upstream 4819110 46309732 ~ 46325685 (-)

Expression


Co-expression Network