G708729



Basic Information


Item Value
gene id G708729
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 41705704 ~ 41722567 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU805947
gtctatttcatgtttggttgcactctggaagtacattttttgcagaactgttcaaactagatgaaatgtggacaattttctgcaagttgcagcaatgacctacagaaataaccacttttccataaacaatgtttatttcatgtttggttgcactctggaagtacattttttgcagaactgttcaaactcgATGAAATGTgtacaattttcagcaagttgcagcaatgacttacagaaataaccacttttccataaacaaggtctatttcatgtttggttgcactctggaagtacattttttgcagaactgttcaaactagatgaaatgtggacaattttcagcaagttgcattAATTgaaccacagaaataaccacttttccataaacaaggtctatttcatgtttggttgcactctggaagtacattttttgcagaactgttcaaactagatgaaatgtggacaattttcagcaagttgcagcaatgacttacagaaataaccacttttccataaacaaggtctaaatcatgattggttgcactttggaagtacattttttgcagaaatgttcaaactagatgaaatgtggacaattttcagcaagttgcagcaatta

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU805947 True 619 lncRNA 0.35 2 41705704 41722567

Neighbor


gene id symbol gene type direction distance location
LOC110529916 LOC106571797 coding downstream 736226 40958142 ~ 40969478 (-)
LOC118965517 NA coding downstream 905667 40779851 ~ 40800037 (-)
LOC110529912 LOC106571799 coding downstream 926073 40724397 ~ 40779631 (-)
armc2 armc2 coding downstream 1036203 40638271 ~ 40669501 (-)
LOC118965516 LOC106588149 coding downstream 1560511 40143911 ~ 40145193 (-)
LOC118965611 NA coding upstream 2954 41725469 ~ 41728987 (-)
klhl18 klhl18 coding upstream 618115 42340682 ~ 42420087 (-)
puf60a puf60 coding upstream 709224 42431791 ~ 42526586 (-)
mycb myc coding upstream 1877187 43599754 ~ 43602305 (-)
LOC118965613 NA coding upstream 2036762 43759329 ~ 43763318 (-)
G708716 NA non-coding downstream 23706 41678186 ~ 41681998 (-)
G708715 NA non-coding downstream 24987 41676777 ~ 41680717 (-)
G708653 NA non-coding downstream 44077 41402045 ~ 41661627 (-)
G708707 NA non-coding downstream 65649 41620080 ~ 41640055 (-)
G708690 NA non-coding downstream 154527 41521486 ~ 41551177 (-)
G708738 NA non-coding upstream 31878 41754445 ~ 41762538 (-)
G708745 NA non-coding upstream 34424 41756991 ~ 41763423 (-)
G708758 NA non-coding upstream 128334 41850901 ~ 41867282 (-)
G708761 NA non-coding upstream 147867 41870434 ~ 41884426 (-)
slc22a16 LOC106571810 other downstream 1746091 39956961 ~ 40017167 (-)
G706683 stxbp5 other downstream 2479391 39219644 ~ 39226313 (-)
G704874 NA other downstream 3391901 38313489 ~ 38313803 (-)
G704702 NA other downstream 3667358 38037725 ~ 38038346 (-)
LOC110530908 otof other downstream 4213547 37474229 ~ 37626960 (-)
G709272 NA other upstream 997204 42719771 ~ 42720699 (-)
G709454 NA other upstream 1448193 43170760 ~ 43171082 (-)
G711133 NA other upstream 2816226 44538793 ~ 44539504 (-)
G712814 NA other upstream 3735210 45457777 ~ 45458248 (-)
crfb16 LOC106568648 other upstream 4588563 46309732 ~ 46325685 (-)

Expression


G708729 Expression in all Baseline Samples

Bar chart with 20 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 15.
End of interactive chart.

G708729 Expression in each Bioproject

Bar chart with 16 bars.
G708729 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 300.
End of interactive chart.

Co-expression Network