G708758


Basic Information

Item Value
gene id G708758
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 41850901 ~ 41867282 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU806001
cagcgtaggctatgtgttacagcactacttttggtgttttttcaggaattgctcttgagaaaatgtcatgtaattgtcccctccaaagttgataacagattttagcccctgctagggcagatggcacacagacagcagaactggggacagatatgcagggacagactggcagagacagggagtctcaggtaagtttgttgcaccccatatacagtcagtgtacagtaccattgccacctactctccagtatgtatgcaggtatatgtactacaaccagcaataccaagaaaggctggttgtaaaagcacatatacctgcatacatactggactgataaggaacactgcttttaactattattagtagtagtattataatgatttgaacaagttgggacaacctttcagttcactactgtacctatcaattaaccagtagtagtgattatggttcctcaatatacatttaacatattacagcgtaggctatgtgttacagcactacttttggtg
>TU806002
cagcgtaggctatgtgttacagcactacttttggtgttttttcaggaattgctcttgagaaaatgtcatgtaattgtcccctccaaagttgataacagattttagcccctgctagggcagatggcacacagacagcagaactggggacagatatgcagggacagactggcagagacagggagtctcaggtaagtttgttgcaccccatatacagtcagtgtacagtaccattgccacctactctccagtatgtatgcaggtatatgtactacaaccagcaataccaagaaaggctggttgtaaaagcacatatacctgcatacatactggactgataaggaacactgcttttaactattattactgtccagtatgtatgcaggtatatgtactacaaccagcaataccaagaaaggctgggtgtaagcacatatacctgcacacatactggactgataaggggcactgcttttaac

Function

NR:

description
PREDICTED: basic immunoglobulin-like variable motif-containing protein isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU806001 False 513 lncRNA 0.41 2 41850901 41867282
TU806002 True 476 lncRNA 0.44 2 41857258 41867282

Neighbor

gene id symbol gene type direction distance location
LOC118965611 NA coding downstream 121914 41725469 ~ 41728987 (-)
LOC110529916 LOC106571797 coding downstream 881423 40958142 ~ 40969478 (-)
LOC118965517 NA coding downstream 1050864 40779851 ~ 40800037 (-)
LOC110529912 LOC106571799 coding downstream 1071270 40724397 ~ 40779631 (-)
armc2 armc2 coding downstream 1181400 40638271 ~ 40669501 (-)
klhl18 klhl18 coding upstream 473400 42340682 ~ 42420087 (-)
puf60a puf60 coding upstream 564509 42431791 ~ 42526586 (-)
mycb myc coding upstream 1732472 43599754 ~ 43602305 (-)
LOC118965613 NA coding upstream 1892047 43759329 ~ 43763318 (-)
efr3a efr3a coding upstream 2317711 44184993 ~ 44436559 (-)
G708745 NA non-coding downstream 87478 41756991 ~ 41763423 (-)
G708738 NA non-coding downstream 88363 41754445 ~ 41762538 (-)
G708729 NA non-coding downstream 128334 41705704 ~ 41722567 (-)
G708716 NA non-coding downstream 168903 41678186 ~ 41681998 (-)
G708761 NA non-coding upstream 3152 41870434 ~ 41884426 (-)
G708762 NA non-coding upstream 16069 41883351 ~ 41931521 (-)
G708764 NA non-coding upstream 44303 41911585 ~ 41929952 (-)
G708769 NA non-coding upstream 65257 41932539 ~ 41942456 (-)
G708775 NA non-coding upstream 101556 41968838 ~ 41975063 (-)
slc22a16 LOC106571810 other downstream 1891288 39956961 ~ 40017167 (-)
G706683 stxbp5 other downstream 2624588 39219644 ~ 39226313 (-)
G704874 NA other downstream 3537098 38313489 ~ 38313803 (-)
G704702 NA other downstream 3812555 38037725 ~ 38038346 (-)
LOC110530908 otof other downstream 4358744 37474229 ~ 37626960 (-)
G709272 NA other upstream 852489 42719771 ~ 42720699 (-)
G709454 NA other upstream 1303478 43170760 ~ 43171082 (-)
G711133 NA other upstream 2671511 44538793 ~ 44539504 (-)
G712814 NA other upstream 3590495 45457777 ~ 45458248 (-)
crfb16 LOC106568648 other upstream 4443848 46309732 ~ 46325685 (-)

Expression


Co-expression Network