Gene
RNA
| Item | Value |
|---|---|
| gene id | G708820 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048572.1 |
| NCBI id | CM023226.2 |
| chromosome length | 91622588 |
| location | 42216344 ~ 42218498 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| hypothetical protein EH28_00382 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU806076 | True | 382 | lncRNA | 0.41 | 2 | 42216344 | 42218498 |
42,215,200
42,215,600
42,216,000
42,216,400
42,216,800
42,217,200
42,217,600
42,218,000
42,218,400
42,218,800
42,219,200
42,219,600
42,220,000
42,220,400
42,220,800
42,221,200
42,221,600
42,222,000
42,222,400
42,222,800
42,223,200
42,223,600
NC_048572.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118965611 | NA | coding | downstream | 487357 | 41725469 ~ 41728987 (-) |
| LOC110529916 | LOC106571797 | coding | downstream | 1246866 | 40958142 ~ 40969478 (-) |
| LOC118965517 | NA | coding | downstream | 1416307 | 40779851 ~ 40800037 (-) |
| LOC110529912 | LOC106571799 | coding | downstream | 1436713 | 40724397 ~ 40779631 (-) |
| armc2 | armc2 | coding | downstream | 1546843 | 40638271 ~ 40669501 (-) |
| klhl18 | klhl18 | coding | upstream | 122184 | 42340682 ~ 42420087 (-) |
| puf60a | puf60 | coding | upstream | 213293 | 42431791 ~ 42526586 (-) |
| mycb | myc | coding | upstream | 1381256 | 43599754 ~ 43602305 (-) |
| LOC118965613 | NA | coding | upstream | 1540831 | 43759329 ~ 43763318 (-) |
| efr3a | efr3a | coding | upstream | 1966495 | 44184993 ~ 44436559 (-) |
| G708810 | NA | non-coding | downstream | 34477 | 42174275 ~ 42181867 (-) |
| G708804 | NA | non-coding | downstream | 41518 | 42140957 ~ 42174826 (-) |
| G708796 | NA | non-coding | downstream | 89624 | 42115738 ~ 42126720 (-) |
| G708735 | NA | non-coding | downstream | 214266 | 41976502 ~ 42002078 (-) |
| G708780 | NA | non-coding | downstream | 218794 | 41997063 ~ 41997550 (-) |
| G708827 | NA | non-coding | upstream | 28465 | 42246963 ~ 42310645 (-) |
| G708830 | NA | non-coding | upstream | 40077 | 42258575 ~ 42259716 (-) |
| G708740 | NA | non-coding | upstream | 62201 | 42280699 ~ 42284286 (-) |
| G708852 | NA | non-coding | upstream | 107844 | 42326342 ~ 42326630 (-) |
| G709096 | NA | non-coding | upstream | 210920 | 42429418 ~ 42430176 (-) |
| slc22a16 | LOC106571810 | other | downstream | 2256731 | 39956961 ~ 40017167 (-) |
| G706683 | stxbp5 | other | downstream | 2990031 | 39219644 ~ 39226313 (-) |
| G704874 | NA | other | downstream | 3902541 | 38313489 ~ 38313803 (-) |
| G704702 | NA | other | downstream | 4177998 | 38037725 ~ 38038346 (-) |
| LOC110530908 | otof | other | downstream | 4724187 | 37474229 ~ 37626960 (-) |
| G709272 | NA | other | upstream | 501273 | 42719771 ~ 42720699 (-) |
| G709454 | NA | other | upstream | 952262 | 43170760 ~ 43171082 (-) |
| G711133 | NA | other | upstream | 2320295 | 44538793 ~ 44539504 (-) |
| G712814 | NA | other | upstream | 3239279 | 45457777 ~ 45458248 (-) |
| crfb16 | LOC106568648 | other | upstream | 4092632 | 46309732 ~ 46325685 (-) |
