G708740


Basic Information

Item Value
gene id G708740
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 42280699 ~ 42284286 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU805979
gtagtagtattataatgatttgaacaagttgggacaacccttcagttaactactgtacctatcaattatccagtagtagtgattatggttcctcaatatacatttaacatattacagcgtaggctatgtgttacagcactacttttggtgttttttcaggaattgctcttgagaaaatgtcatgtaattgtcccctccaaagttgatatcagattttagcccctgctagggcagatggcacacagacagcagaactggggacagatatgcagggacagactggcagagacagggagtctcaggtaagtttgttgcaccccatatacagtaccattgccacctactgtccagtatgtatgcaggtatatgtactacaaccagcaataccaagaaaggctgggtgtaagcacatatacctgcacacatactggactgataaggagcactgcttttagtagtagtattataatgatttgaacaagttttgacaacccttcagttcactactgtacctatcaattatccagtagtagtgattatggttcctcaatatacatttaacatattacagcgtaggctatgtgttacagcactacttttggtgtttttttcaggaattgctcttgagaaaatgtcatgtaattgtcccctccaaagttgatatcagattttagcccctgctagggcagatggcacacagacagcagaactggggacagatatgcagggacagggagtctcaggtaagtttgttgcaccccatatacagtcagtgtacagtaccattgccacctactgtccagtatgtatgtaggtatatgtactacaaccagcaataccaagaaaggctggttgtaaaagcacatatacctgcatacatactggactgataaggagcactgcttttaactattattagtagtagtattataatgatttgaacaagttgggacaacccttcagttaactactgtacctatcaattatccagtagtagtgattatggttcctcaatatacatttaacatattacagcgtaggctgtgttacagcactacttatggtgttttttcaggaattgctcttgagaaaatgtcatgtaattgtcccttctaagttgatatcagattttagcccctgctagggcagatggcacacagacagcagaactggggacagatatgcagggacagactggcagagacagggagtctcaggtaagtttgttgcaccccatatacagtaccattgccacctactgtccagtatgtatgcaggtatatgtactacaaccagcaataccaagaaaggctgggtgtaagcacatatcagtccagtatgtgtgcaggtataaggaacactgctttaactattataagtagggacagggagtctcaggtaagtttgttgcaccccatatacagtaccattgccacctactgtccagtatgtatgcaggtatatgtactacaaccagcaataccaagaaaggctggttaagcacatatacctgcacacatactggactgataaggaacactgctttaactattataagtagggacagggagtctcaggtaagtttgttgcaccccatatacagtcagtgtacagtaccattgccacctactgtccagtatgtatgtaggtatatgtactacaaccagcaataccaagaaaggctggttaagcacatatacctgcacacatactggactgataaggagcactgcttttagtagtagtattataatgatttgaccaagttttgacaacccttcagttcactactgtacctatcaattatccagtagtagtgattatggttcctcaatatacatttaacatattacagcgtaggctatgtgttacagcactacttttggtgtttttttaggaattgctcttgagaaaatgtcatgtaattgtccccttcaaagttgatatccgattttagcccctgctagggcagatggcacacagacagcagaactggggacagatatgcagggacagactggcagagccagggagtctcaggtaagtttgtttgccatccatatacagtcagtgtacagtaccattgccacctactgtccagtatgtatacaggtatatgtactacaaccagcaataccaagaaaggctggttgtaatatacctgcatacatactggactgataaggaacactgctttaactattattagtagtagtattataatgatttgaacaagttgggacaacccttcagttaactactgtacctatcaattatccagtagtagtgattatggt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU805979 True 2297 lncRNA 0.41 2 42280699 42284286
Loading

Neighbor

gene id symbol gene type direction distance location
LOC118965611 NA coding downstream 551712 41725469 ~ 41728987 (-)
LOC110529916 LOC106571797 coding downstream 1311221 40958142 ~ 40969478 (-)
LOC118965517 NA coding downstream 1480662 40779851 ~ 40800037 (-)
LOC110529912 LOC106571799 coding downstream 1501068 40724397 ~ 40779631 (-)
armc2 armc2 coding downstream 1611198 40638271 ~ 40669501 (-)
klhl18 klhl18 coding upstream 56396 42340682 ~ 42420087 (-)
puf60a puf60 coding upstream 147505 42431791 ~ 42526586 (-)
mycb myc coding upstream 1315468 43599754 ~ 43602305 (-)
LOC118965613 NA coding upstream 1475043 43759329 ~ 43763318 (-)
efr3a efr3a coding upstream 1900707 44184993 ~ 44436559 (-)
G708830 NA non-coding downstream 20983 42258575 ~ 42259716 (-)
G708820 NA non-coding downstream 62201 42216344 ~ 42218498 (-)
G708810 NA non-coding downstream 98832 42174275 ~ 42181867 (-)
G708804 NA non-coding downstream 105873 42140957 ~ 42174826 (-)
G708796 NA non-coding downstream 153979 42115738 ~ 42126720 (-)
G708852 NA non-coding upstream 42056 42326342 ~ 42326630 (-)
G709096 NA non-coding upstream 145132 42429418 ~ 42430176 (-)
G709197 NA non-coding upstream 295989 42580275 ~ 42627363 (-)
G709263 NA non-coding upstream 427257 42711543 ~ 42711868 (-)
G709282 NA non-coding upstream 446612 42730898 ~ 42741496 (-)
slc22a16 LOC106571810 other downstream 2321086 39956961 ~ 40017167 (-)
G706683 stxbp5 other downstream 3054386 39219644 ~ 39226313 (-)
G704874 NA other downstream 3966896 38313489 ~ 38313803 (-)
G704702 NA other downstream 4242353 38037725 ~ 38038346 (-)
LOC110530908 otof other downstream 4788542 37474229 ~ 37626960 (-)
G709272 NA other upstream 435485 42719771 ~ 42720699 (-)
G709454 NA other upstream 886474 43170760 ~ 43171082 (-)
G711133 NA other upstream 2254507 44538793 ~ 44539504 (-)
G712814 NA other upstream 3173491 45457777 ~ 45458248 (-)
crfb16 LOC106568648 other upstream 4026844 46309732 ~ 46325685 (-)

Expression

G708740 Expression in all Baseline Samples

Bar chart with 20 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 4.
End of interactive chart.

G708740 Expression in each Bioproject

Bar chart with 17 bars.
G708740 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 100.
End of interactive chart.

Co-expression Network