G709322



Basic Information


Item Value
gene id G709322
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 43055618 ~ 43060881 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU806644
gtactatccatattggtctgcagtactgcatcactgcttggtactatccagagtgttttgcagtacagcatcactgcttggtactctccagagttgtctttagaaCAGATTCACTGCTTAGTACTACccagagtggtatttagtacagcatcactgcttggtactatccagagtggtctttagcactgcatcacttcttggtattattcacat

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU806644 True 213 lncRNA 0.43 2 43055618 43060881

Neighbor


gene id symbol gene type direction distance location
puf60a puf60 coding downstream 529032 42431791 ~ 42526586 (-)
klhl18 klhl18 coding downstream 635531 42340682 ~ 42420087 (-)
LOC118965611 NA coding downstream 1326631 41725469 ~ 41728987 (-)
LOC110529916 LOC106571797 coding downstream 2086140 40958142 ~ 40969478 (-)
LOC118965517 NA coding downstream 2255581 40779851 ~ 40800037 (-)
mycb myc coding upstream 538873 43599754 ~ 43602305 (-)
LOC118965613 NA coding upstream 698448 43759329 ~ 43763318 (-)
efr3a efr3a coding upstream 1124112 44184993 ~ 44436559 (-)
LOC110529930 NA coding upstream 1329997 44390878 ~ 44394639 (-)
LOC110529115 NA coding upstream 1920088 44980969 ~ 44984268 (-)
G709282 NA non-coding downstream 314122 42730898 ~ 42741496 (-)
G709263 NA non-coding downstream 343750 42711543 ~ 42711868 (-)
G709197 NA non-coding downstream 428255 42580275 ~ 42627363 (-)
G709096 NA non-coding downstream 625442 42429418 ~ 42430176 (-)
G708852 NA non-coding downstream 728988 42326342 ~ 42326630 (-)
G709329 NA non-coding upstream 9554 43070435 ~ 43070702 (-)
G709330 NA non-coding upstream 9845 43070726 ~ 43070940 (-)
G709345 NA non-coding upstream 20310 43081191 ~ 43081480 (-)
G709347 NA non-coding upstream 22235 43083116 ~ 43083397 (-)
G709355 NA non-coding upstream 27323 43088204 ~ 43088496 (-)
G709272 NA other downstream 334919 42719771 ~ 42720699 (-)
slc22a16 LOC106571810 other downstream 3096005 39956961 ~ 40017167 (-)
G706683 stxbp5 other downstream 3829305 39219644 ~ 39226313 (-)
G704874 NA other downstream 4741815 38313489 ~ 38313803 (-)
G704702 NA other downstream 5017272 38037725 ~ 38038346 (-)
G709454 NA other upstream 109879 43170760 ~ 43171082 (-)
G711133 NA other upstream 1477912 44538793 ~ 44539504 (-)
G712814 NA other upstream 2396896 45457777 ~ 45458248 (-)
crfb16 LOC106568648 other upstream 3250249 46309732 ~ 46325685 (-)
LOC110529973 LOC106568664 other upstream 3990586 47051073 ~ 47067973 (-)

Expression



Co-expression Network