G709483



Basic Information


Item Value
gene id G709483
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 43191309 ~ 43191600 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU806810
gtagtggaccgTGTTGAGAGTttcaggttccttggtgtccacttcaccaacaaactatcatggtccaaacataccaagacagtcgtatacaccttttccccctcatgagactgaaaatacttggcatgggtcctcagatcctcaaagttatacagctgcaccatcgagagcaccctgaccggttgcatcaccgcctggtatggcaactgctcggcatccaaccgtaaggcgctacagagggtagtgtgtacatcactggggccaagctttctgacatccaggacctatacac

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU806810 True 292 lncRNA 0.51 1 43191309 43191600

Neighbor


gene id symbol gene type direction distance location
puf60a puf60 coding downstream 664723 42431791 ~ 42526586 (-)
klhl18 klhl18 coding downstream 771222 42340682 ~ 42420087 (-)
LOC118965611 NA coding downstream 1462322 41725469 ~ 41728987 (-)
LOC110529916 LOC106571797 coding downstream 2221831 40958142 ~ 40969478 (-)
LOC118965517 NA coding downstream 2391272 40779851 ~ 40800037 (-)
mycb myc coding upstream 408154 43599754 ~ 43602305 (-)
LOC118965613 NA coding upstream 567729 43759329 ~ 43763318 (-)
efr3a efr3a coding upstream 993393 44184993 ~ 44436559 (-)
LOC110529930 NA coding upstream 1199278 44390878 ~ 44394639 (-)
LOC110529115 NA coding upstream 1789369 44980969 ~ 44984268 (-)
G709482 NA non-coding downstream 455 43190593 ~ 43190854 (-)
G709426 NA non-coding downstream 55976 43135034 ~ 43135333 (-)
G709375 NA non-coding downstream 88901 43102205 ~ 43102408 (-)
G709358 NA non-coding downstream 99658 43091418 ~ 43091651 (-)
G709355 NA non-coding downstream 102813 43088204 ~ 43088496 (-)
G709519 NA non-coding upstream 21926 43213526 ~ 43213917 (-)
G709597 NA non-coding upstream 79054 43270654 ~ 43270857 (-)
G709603 NA non-coding upstream 84722 43276322 ~ 43276523 (-)
G709609 NA non-coding upstream 87891 43279491 ~ 43279707 (-)
G709639 NA non-coding upstream 99231 43290831 ~ 43377092 (-)
G709454 NA other downstream 20227 43170760 ~ 43171082 (-)
G709272 NA other downstream 470610 42719771 ~ 42720699 (-)
slc22a16 LOC106571810 other downstream 3231696 39956961 ~ 40017167 (-)
G706683 stxbp5 other downstream 3964996 39219644 ~ 39226313 (-)
G704874 NA other downstream 4877506 38313489 ~ 38313803 (-)
G711133 NA other upstream 1347193 44538793 ~ 44539504 (-)
G712814 NA other upstream 2266177 45457777 ~ 45458248 (-)
crfb16 LOC106568648 other upstream 3119530 46309732 ~ 46325685 (-)
LOC110529973 LOC106568664 other upstream 3859867 47051073 ~ 47067973 (-)
G714425 LOC106568665 other upstream 3986824 47178424 ~ 47178736 (-)

Expression



Co-expression Network