G709597



Basic Information


Item Value
gene id G709597
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 43270654 ~ 43270857 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU806930
cagaatgatatctaatttaCTGATGGACGGTGGCtgacttttgtccatttgcaatatgtttaaacagtgaggtaccatcaccaaaattacattctgaaatcaacaccaacgagcgatggagaggaaccggaatcactgcccggccatcctgagttcatcgggccagtcaatttcgcatTCCTGAAGTTTTTTTGAAAAagtcaa

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU806930 True 204 lncRNA 0.42 1 43270654 43270857

Neighbor


gene id symbol gene type direction distance location
puf60a puf60 coding downstream 744068 42431791 ~ 42526586 (-)
klhl18 klhl18 coding downstream 850567 42340682 ~ 42420087 (-)
LOC118965611 NA coding downstream 1541667 41725469 ~ 41728987 (-)
LOC110529916 LOC106571797 coding downstream 2301176 40958142 ~ 40969478 (-)
LOC118965517 NA coding downstream 2470617 40779851 ~ 40800037 (-)
mycb myc coding upstream 328897 43599754 ~ 43602305 (-)
LOC118965613 NA coding upstream 488472 43759329 ~ 43763318 (-)
efr3a efr3a coding upstream 914136 44184993 ~ 44436559 (-)
LOC110529930 NA coding upstream 1120021 44390878 ~ 44394639 (-)
LOC110529115 NA coding upstream 1710112 44980969 ~ 44984268 (-)
G709519 NA non-coding downstream 56737 43213526 ~ 43213917 (-)
G709483 NA non-coding downstream 79054 43191309 ~ 43191600 (-)
G709482 NA non-coding downstream 79800 43190593 ~ 43190854 (-)
G709426 NA non-coding downstream 135321 43135034 ~ 43135333 (-)
G709375 NA non-coding downstream 168246 43102205 ~ 43102408 (-)
G709603 NA non-coding upstream 5465 43276322 ~ 43276523 (-)
G709609 NA non-coding upstream 8634 43279491 ~ 43279707 (-)
G709639 NA non-coding upstream 19974 43290831 ~ 43377092 (-)
G709651 NA non-coding upstream 64538 43335395 ~ 43337948 (-)
G709653 NA non-coding upstream 68477 43339334 ~ 43345311 (-)
G709454 NA other downstream 99572 43170760 ~ 43171082 (-)
G709272 NA other downstream 549955 42719771 ~ 42720699 (-)
slc22a16 LOC106571810 other downstream 3311041 39956961 ~ 40017167 (-)
G706683 stxbp5 other downstream 4044341 39219644 ~ 39226313 (-)
G704874 NA other downstream 4956851 38313489 ~ 38313803 (-)
G711133 NA other upstream 1267936 44538793 ~ 44539504 (-)
G712814 NA other upstream 2186920 45457777 ~ 45458248 (-)
crfb16 LOC106568648 other upstream 3040273 46309732 ~ 46325685 (-)
LOC110529973 LOC106568664 other upstream 3780610 47051073 ~ 47067973 (-)
G714425 LOC106568665 other upstream 3907567 47178424 ~ 47178736 (-)

Expression



Co-expression Network