G709651



Basic Information


Item Value
gene id G709651
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 43335395 ~ 43337948 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU807007
ggttataacactcttatttaggtgtcataaccagtcataaattaactagagtgtttgggttggtgggttttaacactcttatttaggtgtcataaccagccataaattaactacagtgttggggttggtgggttttaacactcttatgtaggtgtcatagccagccataaagtaactacagtggaaggtttgatGGGTTTAACActcatgtaggtgtcataaccagccataaattaactacagtgttggggtttgtgggttttaacactcttatgtaagtgtcataagcagccataaattaactacagtgttggggttggttggttttaacactcttatttaggtgtcataaccagccataaattaactacagtgtgtgtgttggtgggttttaacactattatgtgggtgtcataaccagccataaaataactacagtgttggggttggtgggttataacactcttatttaggtgtcataaccagtcataaattaactagagtgtttgggttggtgggttttaacactcttatttaggtgtcataaccagccataaattaactacagtgttcgggttggtgggttttaacactcttatgtaggtgtcatagccagccataaagtaactacAGCGGAAGTTTTGGTgagttttaacactcttattt

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU807007 True 666 lncRNA 0.38 2 43335395 43337948

Neighbor


gene id symbol gene type direction distance location
puf60a puf60 coding downstream 808809 42431791 ~ 42526586 (-)
klhl18 klhl18 coding downstream 915308 42340682 ~ 42420087 (-)
LOC118965611 NA coding downstream 1606408 41725469 ~ 41728987 (-)
LOC110529916 LOC106571797 coding downstream 2365917 40958142 ~ 40969478 (-)
LOC118965517 NA coding downstream 2535358 40779851 ~ 40800037 (-)
mycb myc coding upstream 261806 43599754 ~ 43602305 (-)
LOC118965613 NA coding upstream 421381 43759329 ~ 43763318 (-)
efr3a efr3a coding upstream 847045 44184993 ~ 44436559 (-)
LOC110529930 NA coding upstream 1052930 44390878 ~ 44394639 (-)
LOC110529115 NA coding upstream 1643021 44980969 ~ 44984268 (-)
G709609 NA non-coding downstream 55688 43279491 ~ 43279707 (-)
G709603 NA non-coding downstream 58872 43276322 ~ 43276523 (-)
G709597 NA non-coding downstream 64538 43270654 ~ 43270857 (-)
G709519 NA non-coding downstream 121478 43213526 ~ 43213917 (-)
G709483 NA non-coding downstream 143795 43191309 ~ 43191600 (-)
G709653 NA non-coding upstream 1386 43339334 ~ 43345311 (-)
G709655 NA non-coding upstream 9474 43347422 ~ 43353199 (-)
G709657 NA non-coding upstream 18620 43356568 ~ 43362477 (-)
G709661 NA non-coding upstream 26069 43364017 ~ 43370595 (-)
G709662 NA non-coding upstream 31782 43369730 ~ 43372842 (-)
G709454 NA other downstream 164313 43170760 ~ 43171082 (-)
G709272 NA other downstream 614696 42719771 ~ 42720699 (-)
slc22a16 LOC106571810 other downstream 3375782 39956961 ~ 40017167 (-)
G706683 stxbp5 other downstream 4109082 39219644 ~ 39226313 (-)
G704874 NA other downstream 5021592 38313489 ~ 38313803 (-)
G711133 NA other upstream 1200845 44538793 ~ 44539504 (-)
G712814 NA other upstream 2119829 45457777 ~ 45458248 (-)
crfb16 LOC106568648 other upstream 2973182 46309732 ~ 46325685 (-)
LOC110529973 LOC106568664 other upstream 3713519 47051073 ~ 47067973 (-)
G714425 LOC106568665 other upstream 3840476 47178424 ~ 47178736 (-)

Expression



Co-expression Network