G709663



Basic Information


Item Value
gene id G709663
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 43374947 ~ 43377664 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU807029
TGTCATTACAGGccttaaattaactacagtgtttgggttggtgggttttaacactcttatttaggtttcaaaaccagccataaattaactacagtgttggggttggttggtTTAAACACTCCTCTGTAGGTGTCATAACTAGCCATAAATTAAcaacagtgttggggttggtgggttttaactctcttatgtaggtgtcataaccagccataaattaactacagtggaaggtttggtgggttttaacactcttatgtaggtgtcataaaaagccataaattaactacagtggaaggtttggtgggttttaacactcttatgtaggtgtcataaccagccataaattaactacagtgttggagttggtgggttttaacacacttatgtaggtgtcataaccagccataaattaactacagtgtaaggtttggtgggttttaactctcttatgtaggtgtcataaccagccataaattagctacagtggaaggtttggtgggttttaacactcttatgtaggtgtcgtaaccagccataaattaactacagtggaaggtttggtgggttttaactcttatgtaggtgtcataaccagccataaattaactacagtgtttggGTTGGTGGTTTTTAACACTCTTTTTTAGgtttcataaccagccataaattaactacagtgttggggttggtgggttttaacac

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU807029 True 702 lncRNA 0.38 3 43374947 43377664

Neighbor


gene id symbol gene type direction distance location
puf60a puf60 coding downstream 848361 42431791 ~ 42526586 (-)
klhl18 klhl18 coding downstream 954860 42340682 ~ 42420087 (-)
LOC118965611 NA coding downstream 1645960 41725469 ~ 41728987 (-)
LOC110529916 LOC106571797 coding downstream 2405469 40958142 ~ 40969478 (-)
LOC118965517 NA coding downstream 2574910 40779851 ~ 40800037 (-)
mycb myc coding upstream 222090 43599754 ~ 43602305 (-)
LOC118965613 NA coding upstream 381665 43759329 ~ 43763318 (-)
efr3a efr3a coding upstream 807329 44184993 ~ 44436559 (-)
LOC110529930 NA coding upstream 1013214 44390878 ~ 44394639 (-)
LOC110529115 NA coding upstream 1603305 44980969 ~ 44984268 (-)
G709662 NA non-coding downstream 2105 43369730 ~ 43372842 (-)
G709661 NA non-coding downstream 4352 43364017 ~ 43370595 (-)
G709657 NA non-coding downstream 12470 43356568 ~ 43362477 (-)
G709655 NA non-coding downstream 21748 43347422 ~ 43353199 (-)
G709653 NA non-coding downstream 29636 43339334 ~ 43345311 (-)
G709667 NA non-coding upstream 2895 43380559 ~ 43381176 (-)
G709835 NA non-coding upstream 142761 43520425 ~ 43520797 (-)
G710488 NA non-coding upstream 210020 43587684 ~ 43588262 (-)
G710490 NA non-coding upstream 211991 43589655 ~ 43589884 (-)
G710781 NA non-coding upstream 665982 44043646 ~ 44043959 (-)
G709454 NA other downstream 203865 43170760 ~ 43171082 (-)
G709272 NA other downstream 654248 42719771 ~ 42720699 (-)
slc22a16 LOC106571810 other downstream 3415334 39956961 ~ 40017167 (-)
G706683 stxbp5 other downstream 4148634 39219644 ~ 39226313 (-)
G704874 NA other downstream 5061144 38313489 ~ 38313803 (-)
G711133 NA other upstream 1161129 44538793 ~ 44539504 (-)
G712814 NA other upstream 2080113 45457777 ~ 45458248 (-)
crfb16 LOC106568648 other upstream 2933466 46309732 ~ 46325685 (-)
LOC110529973 LOC106568664 other upstream 3673803 47051073 ~ 47067973 (-)
G714425 LOC106568665 other upstream 3800760 47178424 ~ 47178736 (-)

Expression



Co-expression Network