G710488



Basic Information


Item Value
gene id G710488
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 43587684 ~ 43588262 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU807894
AtccacttactacaggagcagccatagtagctccatcagtctgacagtagatctacttactacaggagcagccatagtagctccatcagtctgacagtagatccacttactacaggagcagccatagtagctccatcagtctgacagtagatccacttactacaggagcagccatagtagctccatcagtctgacagtagatccacttGCTACAGGAGCAGTCAtagtagctccatcagtctgacagtagatccacttactacaggagcaGTCATAGTAGCTCCAAcagtctgacagtagatccacttactacaggagcagccatagtagctccatcagtctgacagtagatccacttactacaggagcagtcatagtagctccatcagtctgcCTAGTAGTTCCACCAATCTGTCTTACAGCCTCTGCGTATGATACATCATGATTGTGTCTATATCTCTGGGCCATTTTATACTCTCTCTGTACCAGGCATCCACCAAATGCGGCACTACCCCCCCCAATTACAACAGTTAACCTTCACATTGCTTCCACAGTCACAGTAATCATGTTTTCCTCCAC

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU807894 True 579 lncRNA 0.47 1 43587684 43588262
Loading

Neighbor


gene id symbol gene type direction distance location
puf60a puf60 coding downstream 1061098 42431791 ~ 42526586 (-)
klhl18 klhl18 coding downstream 1167597 42340682 ~ 42420087 (-)
LOC118965611 NA coding downstream 1858697 41725469 ~ 41728987 (-)
LOC110529916 LOC106571797 coding downstream 2618206 40958142 ~ 40969478 (-)
LOC118965517 NA coding downstream 2787647 40779851 ~ 40800037 (-)
mycb myc coding upstream 11492 43599754 ~ 43602305 (-)
LOC118965613 NA coding upstream 171067 43759329 ~ 43763318 (-)
efr3a efr3a coding upstream 596731 44184993 ~ 44436559 (-)
LOC110529930 NA coding upstream 802616 44390878 ~ 44394639 (-)
LOC110529115 NA coding upstream 1392707 44980969 ~ 44984268 (-)
G709835 NA non-coding downstream 66887 43520425 ~ 43520797 (-)
G709667 NA non-coding downstream 206508 43380559 ~ 43381176 (-)
G709663 NA non-coding downstream 210020 43374947 ~ 43377664 (-)
G709662 NA non-coding downstream 214842 43369730 ~ 43372842 (-)
G709661 NA non-coding downstream 217089 43364017 ~ 43370595 (-)
G710490 NA non-coding upstream 1393 43589655 ~ 43589884 (-)
G710781 NA non-coding upstream 455384 44043646 ~ 44043959 (-)
G710785 NA non-coding upstream 464768 44053030 ~ 44056352 (-)
G710800 NA non-coding upstream 479677 44067939 ~ 44068194 (-)
G710795 NA non-coding upstream 480601 44068863 ~ 44069201 (-)
G709454 NA other downstream 416602 43170760 ~ 43171082 (-)
G709272 NA other downstream 866985 42719771 ~ 42720699 (-)
slc22a16 LOC106571810 other downstream 3628071 39956961 ~ 40017167 (-)
G706683 stxbp5 other downstream 4361371 39219644 ~ 39226313 (-)
G704874 NA other downstream 5273881 38313489 ~ 38313803 (-)
G711133 NA other upstream 950531 44538793 ~ 44539504 (-)
G712814 NA other upstream 1869515 45457777 ~ 45458248 (-)
crfb16 LOC106568648 other upstream 2722868 46309732 ~ 46325685 (-)
LOC110529973 LOC106568664 other upstream 3463205 47051073 ~ 47067973 (-)
G714425 LOC106568665 other upstream 3590162 47178424 ~ 47178736 (-)

Expression


G710488 Expression in all Baseline Samples

Bar chart with 20 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 20.
End of interactive chart.

G710488 Expression in each Bioproject

Bar chart with 18 bars.
G710488 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 150.
End of interactive chart.

Co-expression Network