G710795



Basic Information


Item Value
gene id G710795
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 44068863 ~ 44069201 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU808214
TATCTTAATGCATGGGAAGAGATAATTGGACCGAATAGTCTGTGTACCCCAtctaactggctgaagaagagTGACAAAGGCGTTGAAGGAGGCTTTCCAAACCACTTCTACCGAGAGAAAAGAACCAAGGCAGAAATTGGTGTACAGTATCAGATCTAAGCTatcaactgcttttctttcatgttTCTCTCATACTGTGAGAGTCCACTTGGAGTGATCATGGAGAAAGATCTGTTCTAACATTTTCTTATGATGCTGGTATATTGGTTGACGAATGGACAAGACATGAGtggtaaagatgagacattgaaattgggacattatcatgggccgTCCACT

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU808214 True 339 lncRNA 0.41 1 44068863 44069201

Neighbor


gene id symbol gene type direction distance location
LOC118965613 NA coding downstream 305545 43759329 ~ 43763318 (-)
mycb myc coding downstream 466558 43599754 ~ 43602305 (-)
puf60a puf60 coding downstream 1542277 42431791 ~ 42526586 (-)
klhl18 klhl18 coding downstream 1648776 42340682 ~ 42420087 (-)
LOC118965611 NA coding downstream 2339876 41725469 ~ 41728987 (-)
efr3a efr3a coding upstream 115792 44184993 ~ 44436559 (-)
LOC110529930 NA coding upstream 321677 44390878 ~ 44394639 (-)
LOC110529115 NA coding upstream 911768 44980969 ~ 44984268 (-)
basp1 NA coding upstream 1052882 45122083 ~ 45173741 (-)
znf622 znf622 coding upstream 1415817 45485018 ~ 45495101 (-)
G710800 NA non-coding downstream 669 44067939 ~ 44068194 (-)
G710785 NA non-coding downstream 12511 44053030 ~ 44056352 (-)
G710781 NA non-coding downstream 24904 44043646 ~ 44043959 (-)
G710490 NA non-coding downstream 478979 43589655 ~ 43589884 (-)
G710488 NA non-coding downstream 480601 43587684 ~ 43588262 (-)
G710793 NA non-coding upstream 1492 44070693 ~ 44071246 (-)
G710796 NA non-coding upstream 2415 44071616 ~ 44072056 (-)
G710809 NA non-coding upstream 5557 44074758 ~ 44075236 (-)
G710817 NA non-coding upstream 16972 44086173 ~ 44086410 (-)
G710819 NA non-coding upstream 18460 44087661 ~ 44087861 (-)
G709454 NA other downstream 897781 43170760 ~ 43171082 (-)
G709272 NA other downstream 1348164 42719771 ~ 42720699 (-)
slc22a16 LOC106571810 other downstream 4109250 39956961 ~ 40017167 (-)
G706683 stxbp5 other downstream 4842550 39219644 ~ 39226313 (-)
G704874 NA other downstream 5755060 38313489 ~ 38313803 (-)
G711133 NA other upstream 469592 44538793 ~ 44539504 (-)
G712814 NA other upstream 1388576 45457777 ~ 45458248 (-)
crfb16 LOC106568648 other upstream 2241929 46309732 ~ 46325685 (-)
LOC110529973 LOC106568664 other upstream 2982266 47051073 ~ 47067973 (-)
G714425 LOC106568665 other upstream 3109223 47178424 ~ 47178736 (-)

Expression



Co-expression Network