G710822


Basic Information

Item Value
gene id G710822
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 44094015 ~ 44095958 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU808241
GTCCAATTGAAAAGACAAAGGGAAACATAAAATATGTAAGAATATAATTTGCATATTATATATTTAAATCAAAATATTAAAAGTGGTCTAGTACAGAATAGAAAGtacaagtcatttaaaaaaaactggaaTGAGAAACCATGATACACAGCTCTGAAGGCCACTTGTGTAAGGTCAACATTTTCTTAAGAAATGAGAGAACATCACACTGTAGACATGTCTATGTACATCCACATTTCCATACATAAGAGTTGAAGCACTTTATGGCATGAGAATGAATCGAGAGGGCAGTAGTGCTATGATAAATGAAGGCCACTAGTGTATTGTAACACTGTCACAGCAACATAATGCCTGCTGACTAACAACTGGATCGCCTTCATTAGGTAGGGAAAAAAAGGGGGGGTGGGACTCCCTatacttgtccaataagaaatgtacttttgtgttttctgttgcaacataaaaaaaaaagtctGTTGTGtcttaatgaacatgaccctacACTCATGTTGACCGACGTACGAGTCGAATGACTTTCTCAAAGCATTCACGTCCATTGGGAGCAAGTGTAGAACGTCTATCAGTGATTATGTCACAGTTTTGCAAGGCCATATAACAGCAAGTTAGGTTTCACCAAAAAATATATGAACATACACTGAGAACTTGGAACTGTAAAAGGGCAAGGCACAAATAATTCACAGCGTTCATATGTCCATAAGTACAGGTTATGCCAAATGTATACATCATGAGAAGTGCATTGCATGGTATGCATTTAAATGACCAAAAGTCCAAAAGGAGAACAAAACATGTATCACAGCAAGTACTACTGCCCTCTCGATTAATTCTTATGCCATGAAGTTCTTCTACTCTTCAATGTATAGAAGTTTGAATGTACATGTCCACAGTGTGATAAATATGCAGAATAACATACATATTTTAGACACCTTTTGTAAAAGGCCAAAATTATAAACAAAGGGTTAACTTATTGGTAAAGGGTTAACTTAATTTTATGTTCAAATCTCTTGTCATCCGTTACAGCATGAACAATATTCTGCGTTGTGTTTTACTGTTGGATAAGGTGCACATTTTGACATAAGGACCAGTTATAGTTTTTGAAGATGGCTGTTAATCCAAATATCACTTCTGAGGAGGTATGGAGCAAGTATGGCTTACGCCCAAACGCAAAACAACCCCAAGCACCTTCACCCTGACCCCTAAACACTTGTACAGATCTGTGAGGATTGGACTGGTGTGAGCAATATGGTGAACATTTCACTTAGACAAAAAGAGGCCATTGTGGAGCTCCACAAGTGCGTTTTGGGATTGGGCTTCACAGCTATACTTATGCAATGTTCCATGTCAAATTCACTAGGcacccaacaacaacaaaaaactgattGAAACAGGTAAGGGACTTAACTGAAggtgtccaataagaaacagttGTTTCCATTGCAAAAATGCtctgttgcaaaacattgtgTGTGCACAGGTTTGGGTAGGTTACTATTTACCTgtcaaattgtaatcagtaacatttggattacccaaactctaACGTttttactttcagttacttttagattactttccccttaggAGGCATTTGACCATATCTATtgctattgcaggataaatcaatgttagagtTTACACAGTTAACAATAAATGGATGTTACATTTGACTTTATGCGTTGGTtgtgtaggcttcttctaaccaaTTTCTTTATACTTTAATACAGATATTAGGTtatatatttacattaaaaaaaaacaagtgtcAGATTTCCAATCCAAATAATTTAATACCCCTTTATTTTCAAGAATAAGACTTGGAAATATACaacgcattcagaaagtattaagcccccttgacattttccacattttgttacgttacagccttattctaaaatgtattaaatatttttttctcaatctaca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU808241 True 1944 lncRNA 0.36 1 44094015 44095958

Neighbor

gene id symbol gene type direction distance location
LOC118965613 NA coding downstream 330697 43759329 ~ 43763318 (-)
mycb myc coding downstream 491710 43599754 ~ 43602305 (-)
puf60a puf60 coding downstream 1567429 42431791 ~ 42526586 (-)
klhl18 klhl18 coding downstream 1673928 42340682 ~ 42420087 (-)
LOC118965611 NA coding downstream 2365028 41725469 ~ 41728987 (-)
efr3a efr3a coding upstream 89035 44184993 ~ 44436559 (-)
LOC110529930 NA coding upstream 294920 44390878 ~ 44394639 (-)
LOC110529115 NA coding upstream 885011 44980969 ~ 44984268 (-)
basp1 NA coding upstream 1026125 45122083 ~ 45173741 (-)
znf622 znf622 coding upstream 1389060 45485018 ~ 45495101 (-)
G710820 NA non-coding downstream 5326 44088363 ~ 44088689 (-)
G710819 NA non-coding downstream 6154 44087661 ~ 44087861 (-)
G710817 NA non-coding downstream 7605 44086173 ~ 44086410 (-)
G710809 NA non-coding downstream 18779 44074758 ~ 44075236 (-)
G710796 NA non-coding downstream 21959 44071616 ~ 44072056 (-)
G711007 LOC106584485 non-coding upstream 341947 44437905 ~ 44438369 (-)
G711107 NA non-coding upstream 426036 44521994 ~ 44522225 (-)
G711121 NA non-coding upstream 436007 44531965 ~ 44532192 (-)
G711131 NA non-coding upstream 441867 44537825 ~ 44538121 (-)
G712181 NA non-coding upstream 454311 44550269 ~ 44629270 (-)
G709454 NA other downstream 922933 43170760 ~ 43171082 (-)
G709272 NA other downstream 1373316 42719771 ~ 42720699 (-)
slc22a16 LOC106571810 other downstream 4134402 39956961 ~ 40017167 (-)
G706683 stxbp5 other downstream 4867702 39219644 ~ 39226313 (-)
G704874 NA other downstream 5780212 38313489 ~ 38313803 (-)
G711133 NA other upstream 442835 44538793 ~ 44539504 (-)
G712814 NA other upstream 1361819 45457777 ~ 45458248 (-)
crfb16 LOC106568648 other upstream 2215172 46309732 ~ 46325685 (-)
LOC110529973 LOC106568664 other upstream 2955509 47051073 ~ 47067973 (-)
G714425 LOC106568665 other upstream 3082466 47178424 ~ 47178736 (-)

Expression


Co-expression Network