Gene
RNA
| Item | Value |
|---|---|
| gene id | G712421 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048572.1 |
| NCBI id | CM023226.2 |
| chromosome length | 91622588 |
| location | 44978973 ~ 44979408 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: U3 small nucleolar ribonucleoprotein protein IMP4-like isoform X1 |
| id | description |
|---|
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU809935 | True | 277 | lncRNA | 0.53 | 2 | 44978973 | 44979408 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| efr3a | efr3a | coding | downstream | 542414 | 44184993 ~ 44436559 (-) |
| LOC110529930 | NA | coding | downstream | 584334 | 44390878 ~ 44394639 (-) |
| LOC118965613 | NA | coding | downstream | 1215655 | 43759329 ~ 43763318 (-) |
| mycb | myc | coding | downstream | 1376668 | 43599754 ~ 43602305 (-) |
| puf60a | puf60 | coding | downstream | 2452387 | 42431791 ~ 42526586 (-) |
| LOC110529115 | NA | coding | upstream | 1561 | 44980969 ~ 44984268 (-) |
| basp1 | NA | coding | upstream | 142675 | 45122083 ~ 45173741 (-) |
| znf622 | znf622 | coding | upstream | 505610 | 45485018 ~ 45495101 (-) |
| retreg1 | fam134b | coding | upstream | 529673 | 45509081 ~ 45601564 (-) |
| nol7 | nol7 | coding | upstream | 699451 | 45678859 ~ 45684992 (-) |
| G712181 | NA | non-coding | downstream | 349703 | 44550269 ~ 44629270 (-) |
| G712194 | NA | non-coding | downstream | 369581 | 44564442 ~ 44609392 (-) |
| G712213 | NA | non-coding | downstream | 384978 | 44589551 ~ 44593995 (-) |
| G712212 | NA | non-coding | downstream | 385579 | 44588373 ~ 44593394 (-) |
| G712208 | NA | non-coding | downstream | 386678 | 44583735 ~ 44592295 (-) |
| G712622 | NA | non-coding | upstream | 244811 | 45224219 ~ 45224544 (-) |
| G712787 | NA | non-coding | upstream | 441763 | 45421171 ~ 45421678 (-) |
| G712788 | NA | non-coding | upstream | 442541 | 45421949 ~ 45422344 (-) |
| G712789 | NA | non-coding | upstream | 444972 | 45424380 ~ 45424611 (-) |
| G712794 | myo10 | non-coding | upstream | 451365 | 45430773 ~ 45430996 (-) |
| G711133 | NA | other | downstream | 439469 | 44538793 ~ 44539504 (-) |
| G709454 | NA | other | downstream | 1807891 | 43170760 ~ 43171082 (-) |
| G709272 | NA | other | downstream | 2258274 | 42719771 ~ 42720699 (-) |
| slc22a16 | LOC106571810 | other | downstream | 5019360 | 39956961 ~ 40017167 (-) |
| G706683 | stxbp5 | other | downstream | 5752660 | 39219644 ~ 39226313 (-) |
| G712814 | NA | other | upstream | 478369 | 45457777 ~ 45458248 (-) |
| crfb16 | LOC106568648 | other | upstream | 1331722 | 46309732 ~ 46325685 (-) |
| LOC110529973 | LOC106568664 | other | upstream | 2072059 | 47051073 ~ 47067973 (-) |
| G714425 | LOC106568665 | other | upstream | 2199016 | 47178424 ~ 47178736 (-) |
| G715865 | NA | other | upstream | 3309534 | 48288942 ~ 48289581 (-) |
