Gene
RNA
| Item | Value |
|---|---|
| gene id | G712803 |
| gene name | myo10 |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048572.1 |
| NCBI id | CM023226.2 |
| chromosome length | 91622588 |
| location | 45445209 ~ 45445543 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| symbol | description |
|---|---|
| myo10 | Predicted to enable ATP binding activity; actin binding activity; and cytoskeletal motor activity. Predicted to act upstream of or within signal transduction. Predicted to be located in cytoplasm and cytoskeleton. Predicted to be part of myosin complex. Is expressed in midbrain hindbrain boundary; otic vesicle; and rhombomere. Orthologous to human MYO10 (myosin X). |
| description |
|---|
| unconventional myosin-X |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU810327 | True | 335 | lncRNA | 0.51 | 1 | 45445209 | 45445543 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| basp1 | NA | coding | downstream | 271468 | 45122083 ~ 45173741 (-) |
| LOC110529115 | NA | coding | downstream | 460941 | 44980969 ~ 44984268 (-) |
| efr3a | efr3a | coding | downstream | 1008650 | 44184993 ~ 44436559 (-) |
| LOC110529930 | NA | coding | downstream | 1050570 | 44390878 ~ 44394639 (-) |
| LOC118965613 | NA | coding | downstream | 1681891 | 43759329 ~ 43763318 (-) |
| znf622 | znf622 | coding | upstream | 39475 | 45485018 ~ 45495101 (-) |
| retreg1 | fam134b | coding | upstream | 63538 | 45509081 ~ 45601564 (-) |
| nol7 | nol7 | coding | upstream | 233316 | 45678859 ~ 45684992 (-) |
| amph | amph | coding | upstream | 347705 | 45793248 ~ 45924730 (-) |
| tmem71 | tmem71 | coding | upstream | 560868 | 46006411 ~ 46033000 (-) |
| G712794 | myo10 | non-coding | downstream | 14213 | 45430773 ~ 45430996 (-) |
| G712789 | NA | non-coding | downstream | 20598 | 45424380 ~ 45424611 (-) |
| G712788 | NA | non-coding | downstream | 22865 | 45421949 ~ 45422344 (-) |
| G712787 | NA | non-coding | downstream | 23531 | 45421171 ~ 45421678 (-) |
| G712622 | NA | non-coding | downstream | 220665 | 45224219 ~ 45224544 (-) |
| G712804 | NA | non-coding | upstream | 1726 | 45447269 ~ 45447502 (-) |
| G712806 | NA | non-coding | upstream | 4052 | 45449595 ~ 45449861 (-) |
| G712809 | NA | non-coding | upstream | 6665 | 45452208 ~ 45452434 (-) |
| G712810 | myo10 | non-coding | upstream | 7489 | 45453032 ~ 45453316 (-) |
| G712812 | myo10 | non-coding | upstream | 10366 | 45455909 ~ 45456527 (-) |
| G711133 | NA | other | downstream | 905705 | 44538793 ~ 44539504 (-) |
| G709454 | NA | other | downstream | 2274127 | 43170760 ~ 43171082 (-) |
| G709272 | NA | other | downstream | 2724510 | 42719771 ~ 42720699 (-) |
| slc22a16 | LOC106571810 | other | downstream | 5485596 | 39956961 ~ 40017167 (-) |
| G706683 | stxbp5 | other | downstream | 6218896 | 39219644 ~ 39226313 (-) |
| G712814 | NA | other | upstream | 12234 | 45457777 ~ 45458248 (-) |
| crfb16 | LOC106568648 | other | upstream | 865587 | 46309732 ~ 46325685 (-) |
| LOC110529973 | LOC106568664 | other | upstream | 1605924 | 47051073 ~ 47067973 (-) |
| G714425 | LOC106568665 | other | upstream | 1732881 | 47178424 ~ 47178736 (-) |
| G715865 | NA | other | upstream | 2843399 | 48288942 ~ 48289581 (-) |
