G712079


Basic Information

Item Value
gene id G712079
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 46053799 ~ 46054010 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU809569
GGGAAATgtaacttatcccagaggctgctccaagacgccGGTGGCGgcgaagaggtattcggagtgctTTGgagtgactgggaatatggtcgattacaaacagtgtagttaatccctccgtaaggcaagcaaacagacttacagctgtaatcgcagcaaaaggtggcgctacaaagtattaacttaagggggctgaataattttgcacgccc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU809569 True 212 lncRNA 0.49 1 46053799 46054010

Neighbor

gene id symbol gene type direction distance location
LOC110529944 LOC106568640 coding upstream 44811 46003081 ~ 46008988 (+)
LOC110529945 LOC106568641 coding upstream 78791 45964664 ~ 45975008 (+)
stard3nl stard3nl coding upstream 293560 45725701 ~ 45760239 (+)
epdr1 LOC106568636 coding upstream 345287 45692358 ~ 45708512 (+)
ranbp9 ranbp9 coding upstream 377414 45651211 ~ 45676385 (+)
slc39a6 slc39a6 coding downstream 210630 46264640 ~ 46293864 (+)
cldn15la LOC106568649 coding downstream 298776 46352786 ~ 46356523 (+)
saga LOC106568650 coding downstream 308635 46362645 ~ 46376820 (+)
LOC110529955 NA coding downstream 324429 46378439 ~ 46384254 (+)
proca proc coding downstream 345009 46399019 ~ 46406905 (+)
G712074 NA non-coding upstream 3319 46050136 ~ 46050480 (+)
G712052 NA non-coding upstream 55327 45998083 ~ 45998472 (+)
G712051 NA non-coding upstream 55900 45997660 ~ 45997899 (+)
G712049 NA non-coding upstream 56632 45996957 ~ 45997167 (+)
G712048 NA non-coding upstream 60464 45993124 ~ 45993335 (+)
G712061 LOC106568643 non-coding downstream 68757 46122767 ~ 46126238 (+)
G712121 NA non-coding downstream 88729 46142739 ~ 46144022 (+)
G713292 NA non-coding downstream 192069 46246079 ~ 46246404 (+)
G713340 NA non-coding downstream 264637 46318647 ~ 46373541 (+)
G713366 sft2d3 non-coding downstream 408617 46462627 ~ 46463602 (+)
G711912 NA other upstream 259250 45793269 ~ 45794549 (+)
G711845 NA other upstream 406422 45646857 ~ 45647377 (+)
G711021 NA other upstream 1604826 44448584 ~ 44448973 (+)
G709490 NA other upstream 2856157 43196560 ~ 43197642 (+)
G708448 NA other upstream 4669616 41380025 ~ 41384183 (+)
G713405 NA other downstream 411388 46465398 ~ 46466227 (+)
G713574 NA other downstream 661905 46715915 ~ 46769246 (+)
G716035 LOC106581475 other downstream 2483733 48537743 ~ 48544164 (+)
G716133 NA other downstream 2706333 48760343 ~ 48760740 (+)
G716862 NA other downstream 3278831 49332841 ~ 49333772 (+)

Expression


Co-expression Network