G713667


Basic Information

Item Value
gene id G713667
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 46264380 ~ 46272772 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU811246
CCTGGActacctattgagatgtgccttaAGTTAAGTCAGGTGTTAAAAAAGGTGAAAAAGGAGACTGGAGCTCCACTTGAAGGATTTACCTGTCGAAGAGAGCTTCCAGGTGCTGCCGCTGGGTCTGTTCTGCCATCTGGGTGTCGATAGTGGACAGAAACTCACTGCCACTTTTACCAGTCTCCCCAGTGACACGAGTGCACTCTGGACCAGTGTCCCCAGTAGAGCAGGGCCAACACATAGCAAGACCCAGCACTGCCAGGGCAGCTGCTGCCCACCTCCTCGTTGCCATTCCCTCTACTGGAAACCGTAGTGCTTGTAGGATACACGTTTCTTCCAAACCTTCCTTCGAATGAAGTGTGTGTGGTACAGAATAGTGCTGACTATAGTATTTATCTCGGCAGGAGAGACGTCTGGTGGCCAAAATGTGCAATAGGGTGCATACCAgtattaggtgcattaccgccacctaccgGTATGGAGTGTGGTGAGACTGATGTTGTTCTAGATTCTGCGCTCTAGTCTACATGACTGGAAGAAGGAAGTTATTGATAAATGGATTACAGTGTGTTCTGGGCGGATTTTGAGCAAATTAGAGAAGGTTGAAGCTTATTCCCAGGGACGTAATCATTCTTCTGAGCGTTTGCCtttgatgtcaaatcaaatttgattggttacatacacatggttcgcagatgtt

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU811246 True 700 lncRNA 0.48 2 46264380 46272772
Loading

Neighbor

gene id symbol gene type direction distance location
tmeff1a tmeff1 coding downstream 22943 46163653 ~ 46241437 (-)
cavin4a LOC106568643 coding downstream 130392 46122744 ~ 46133988 (-)
ift57 ift57 coding downstream 190334 46061743 ~ 46074046 (-)
tmem71 tmem71 coding downstream 231380 46006411 ~ 46033000 (-)
amph amph coding downstream 339650 45793248 ~ 45924730 (-)
crfb16 LOC106568648 coding upstream 36960 46309732 ~ 46325685 (-)
LOC110529956 LOC106568794 coding upstream 116170 46388942 ~ 46395118 (-)
dusp28 LOC106568652 coding upstream 134961 46407733 ~ 46417579 (-)
sft2d3 sft2d3 coding upstream 189853 46462625 ~ 46463692 (-)
si:ch1073-184j22.1 LOC106568655 coding upstream 254878 46527650 ~ 46556891 (-)
G713293 NA non-coding downstream 17951 46246065 ~ 46246429 (-)
G713287 NA non-coding downstream 22323 46241856 ~ 46242057 (-)
G713211 NA non-coding downstream 127442 46136731 ~ 46136938 (-)
G713202 NA non-coding downstream 142649 46121282 ~ 46121731 (-)
G713203 NA non-coding downstream 143559 46120054 ~ 46120821 (-)
G713694 NA non-coding upstream 81887 46354659 ~ 46424529 (-)
G713736 NA non-coding upstream 92653 46365425 ~ 46376646 (-)
G713738 NA non-coding upstream 108794 46381566 ~ 46387729 (-)
G713742 proc non-coding upstream 126244 46399016 ~ 46406912 (-)
G713766 NA non-coding upstream 187918 46460690 ~ 46462111 (-)
G712814 NA other downstream 806132 45457777 ~ 45458248 (-)
G711133 NA other downstream 1724876 44538793 ~ 44539504 (-)
G709454 NA other downstream 3093298 43170760 ~ 43171082 (-)
G709272 NA other downstream 3543681 42719771 ~ 42720699 (-)
slc22a16 LOC106571810 other downstream 6304767 39956961 ~ 40017167 (-)
LOC110529973 LOC106568664 other upstream 778695 47051073 ~ 47067973 (-)
G714425 LOC106568665 other upstream 905652 47178424 ~ 47178736 (-)
G715865 NA other upstream 2016170 48288942 ~ 48289581 (-)
dlg1l LOC106568684 other upstream 2269519 48356004 ~ 48616588 (-)

Expression

G713667 Expression in all Baseline Samples

Bar chart with 20 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 1.
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G713667 Expression in each Bioproject

Bar chart with 13 bars.
G713667 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 12.
End of interactive chart.

Co-expression Network