G713694


Basic Information

Item Value
gene id G713694
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 46354659 ~ 46424529 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU811275
ggggtattgtgtgtagattggttagggggattttttttaaatcgattttagaataaggctgtaacgtaacaaaatgtggaaaaggggaagggttctgaatactttccaaatgcaatgTACATACGTGGGAGTGAGTGCTCAAGTACAGCTCTCCACGTTCATTGTCATGTCTGCGTGTGGATATTAGAAACTGGCCGTGTCTGAATACCCGTACTTGCATTCTAAATAGAAGTAATGTTGGGTATGGGCAAAAATTAAGCTTTTataacattttgaaaatgtagtatcctttaaatgccaggatgtcatactcatttaGGCTTTTCATATAGTAAAATTTGCTGCACACTATTGAGGAAGACAAACATCAATGAAGACAGTTgtcagctggtcagcgcatgctcagagtacgcgtcctggtaatccgcctggccctgtggccttgtgagtaagacctttaaacaggtcgacATTCACATTGGCTATGGACAGTGTGATCACTTAGTCCCCTGGAACAggtggtgctctcatgcatggtttcatgtttgcctcgaagcgagcatagaaagaattcagctcgtctggtagggttgcgtcactgggcagcttctggctgggtttccctttgtaatttgtgatagtttgccagccctgccacatccaatgagCCAAAGAGCGTCAGAGAagttgtagtaggattcgatcgtTCATAATATTTGTCAAACATTACCAGCATTTAGCCTATATTTATGTAATTAAAATCTTAAAAAGGTTAGGCTACTTTTTCTGTCACCTCCCTCGTGTCAGCATCGGTTTGGACATGACACTGTAAGCCAATATCACCTACATATTACCTACTCTTTGACATGCAggcttttttttttatgtatgttTAGGCCTACATGAAAAACAGATTTGAATATTATTCCAATtttttttgtttgttgcatcAACCTCAAAATCCTTCAAAAACAATTAGCAAAATTCATGGTGAAAGAGAAAAAGATAAACATGGGTAACAACAGTCAAATATGTGCTCTTAAATGTGAGCGTCACAAAAgtgggagaggggaggtgaggtgGTACGGGAGGGACGTCTTAGACGTAGGCTTTGGTGGAATCCGGCTCAGACCTGGCAGCAGGTGCGTAGATTGTTTTAGGCTGACTCGTTGCGTAGTACCCTGCTTTAGGCTTTTCACTTTTTGCCCTCTTGCAGGCACAGCAGAGAAGAGATCCTCCCAGCATGGACAGAGAGGCTGCGCCCCAGCCCAGGAAGAGACCAGTCCCCAACTCAAACCTGCACACAACAAAAATCAGTAAGGAACAAAACaatatgtatacagtatgtagttatGTCTTATTATGTGCATCAAAGGGTGTGTCACATCTTCTATGTGTctgaatttaatttatttttgtgGTTACTGAAAAAAATGGTTTTGTTTGGTCTTTCCACTTACTTCACCCCACCAAAGAATGGGTTGTTAAAGTCCTCTACAACTCGGGTGGCGTACCAAGAACAGCAGATCAGCTCGCAGACCAGCGAGTATAAAGAGGCATCCACCAGTGACGGCAATCTTGGCCTTTGCCTGCTCCGTGGCACTGCCAATCTTAATGCACTTTAGCCCCAGCAGAGACACGATCATAGACACCAGCCCTAAGAGCAGACTGATGACCATCAGGGCACGGCTCGCCTGTACATGGCCtgagg

Function

NR:

description
claudin-15-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU811275 True 1711 lncRNA 0.44 4 46354659 46424529

Neighbor

gene id symbol gene type direction distance location
crfb16 LOC106568648 coding downstream 28974 46309732 ~ 46325685 (-)
tmeff1a tmeff1 coding downstream 113222 46163653 ~ 46241437 (-)
cavin4a LOC106568643 coding downstream 220671 46122744 ~ 46133988 (-)
ift57 ift57 coding downstream 280613 46061743 ~ 46074046 (-)
tmem71 tmem71 coding downstream 321659 46006411 ~ 46033000 (-)
sft2d3 sft2d3 coding upstream 38096 46462625 ~ 46463692 (-)
si:ch1073-184j22.1 LOC106568655 coding upstream 103121 46527650 ~ 46556891 (-)
pex5lb LOC106568657 coding upstream 227299 46651828 ~ 46803169 (-)
nebl LOC106568663 coding upstream 591356 47015885 ~ 47027075 (-)
dnajc1 dnjc1 coding upstream 602665 47027194 ~ 47035362 (-)
G713660 NA non-coding downstream 15615 46254476 ~ 46339044 (-)
G713667 NA non-coding downstream 81887 46264380 ~ 46272772 (-)
G713293 NA non-coding downstream 108230 46246065 ~ 46246429 (-)
G713287 NA non-coding downstream 112602 46241856 ~ 46242057 (-)
G713211 NA non-coding downstream 217721 46136731 ~ 46136938 (-)
G713766 NA non-coding upstream 36161 46460690 ~ 46462111 (-)
G713771 NA non-coding upstream 39455 46463984 ~ 46464406 (-)
G713772 NA non-coding upstream 40239 46464768 ~ 46465308 (-)
G713773 NA non-coding upstream 41093 46465622 ~ 46466193 (-)
G713774 NA non-coding upstream 42087 46466616 ~ 46466827 (-)
G712814 NA other downstream 896411 45457777 ~ 45458248 (-)
G711133 NA other downstream 1815155 44538793 ~ 44539504 (-)
G709454 NA other downstream 3183577 43170760 ~ 43171082 (-)
G709272 NA other downstream 3633960 42719771 ~ 42720699 (-)
LOC110529973 LOC106568664 other upstream 626938 47051073 ~ 47067973 (-)
G714425 LOC106568665 other upstream 753895 47178424 ~ 47178736 (-)
G715865 NA other upstream 1864413 48288942 ~ 48289581 (-)
dlg1l LOC106568684 other upstream 2117762 48356004 ~ 48616588 (-)
G716463 LOC106591423 other upstream 2335383 48759912 ~ 48761163 (-)

Expression


Co-expression Network