G713870 (LOC106568656)


Basic Information

Item Value
gene id G713870
gene name LOC106568656
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 46596479 ~ 46607316 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU811470
CAAACAGCATGCAgatacataaaaatggtatccatgagttcataggactctgggtaagtagataAACGGTCTAAATCTTGAAATATCACAGTATCCCTTTAATCTAATGATTAATAATCAATACTGTTTAGGTGCGTATGGCAGTAGCACATTACCAATGCTCCTATAAAAAACTGGGGGAGAAACTCACTTCCTTTCGGCAGATGCGATATTTATGGCATCCATGACTGCTTTGATTGCTTCTGTGATCTGCCACGCCCTGAGCGTGTGCTGCTCAAACTTGGTCTTGACCGCAGAGTGTGAGATGAACTCCTGTGCAGTCGTAAATACAGTAAGTTAGTGTGACGATGCCAATCAACGTGAAATTGACAATGATATTACAATGGACCATGACAATCAGTTATGCTTCAGTGCTTGCCTCAAAAGTCCTCTCGAATCTCTGGAACTCCCTCAGTCTCTCGTGGAATCCCTCTGCTAAAGCGCCACCTAGAAAGACCAGCAGAAGTCCAAATAAAAATAATAGCCGAGGACCTCCAGCATATTAAGTTATAGTTAATGTGGGCATTCATGGATGGCCGGGTAAGGTGAGCAGTTCAAAGCTTTAAGATAGCAATGTTTTTGAGGCGAGACAGTAACAGGAGAGAGATGCCTATTACAGGGCCGATGGAGGAAAATCTGTCAGGAGTGTGCTGGCAACTGCTTGTCAACTTCTTATGAATGCCGATGTATTCAAGTAAATTGATATTTTGCCTTCTAAATTACCATAACCATATCAATATCGTATAATTATTGTTCCCAAACCTGATCAGCGAGCCAgcccagccagtcaatcagcGTCATGCAACCTCGCCCAACTAGCCTTTGGTCCCTCCTCACTGATCTCACCTGTCTCGGGCATGCCCTGGGCACAGTGCATCCTGGAGCTGAGCACCTCCTTGGCCGACACAAAGAAGATTCTGCCCGGAGCCTCCTCTTGTCTCACCACCCTCAGCTCCTCCACCAGGAAACTCACACAGCGGTCCATGTGCTGCTTACGCACCTGAGGGAGCTCATTATCCATTAGGTTTGACATTTTGGTCACTCAAAAAGTAGGCAAATCGAATGAAGGACTCAATGAAGCGCACCATTAGCCCTTTATAAGAGGGACCCATCTTGTTTTTCTCACAGCTAAACTACACAAGACATGTAATGTAAGCATAGTGTCCACAAAGCGCAAGCATGGATGACACTGAGCCACTGTGAGCAAAGAGAAATGATACTCCAGCTGAGCAAGCAGCAAGTCAATGAAGCGATCTTGCGCTGCTTAAGTGTCTATTTCAAGTATTTCACTCCTGCTTTCAGTGTTCTCAACAAGCGGATTTCACTATTGATTGATCACGATTGATCTCCTTTTGCTGCTTCTGGTGTAACATGGCAAAAACAACGCTTATGAAATGCTTGCACTATGCTTGCAGTGTAGTTTCACAGTCAAACTCACTTCATCAATGTACTCGGGCTCCCACGCAGAGGCATCCCAGCGGTTGTGCAGGATAAAAATGTTTGGCTTGGATATTCGCTCGCTCACTTTGTGGAAAAACAGCTTCTCtgtgTTCATCAGTGTGGATTCTGCATTGCCCACCAACACAAAGACGTCAGCATCCAGACAGAACTTGTCGATCCAGCTGTCCAGGTAAGAGGTCACATCAGTCCCTGGGCTGTCCATAATAACAAGGTCATCCCTCAGCAGGGCACAC

Function

NR:

description
PREDICTED: mitofusin-1-like isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU811470 True 1733 lncRNA 0.46 3 46596479 46607316

Neighbor

gene id symbol gene type direction distance location
si:ch1073-184j22.1 LOC106568655 coding downstream 39588 46527650 ~ 46556891 (-)
sft2d3 sft2d3 coding downstream 132787 46462625 ~ 46463692 (-)
dusp28 LOC106568652 coding downstream 178900 46407733 ~ 46417579 (-)
LOC110529956 LOC106568794 coding downstream 201361 46388942 ~ 46395118 (-)
crfb16 LOC106568648 coding downstream 270794 46309732 ~ 46325685 (-)
pex5lb LOC106568657 coding upstream 44512 46651828 ~ 46803169 (-)
nebl LOC106568663 coding upstream 408569 47015885 ~ 47027075 (-)
dnajc1 dnjc1 coding upstream 419878 47027194 ~ 47035362 (-)
LOC110529973 LOC106568664 coding upstream 443757 47051073 ~ 47067973 (-)
LOC110529976 LOC106568668 coding upstream 622771 47230087 ~ 47260852 (-)
G713869 NA non-coding downstream 1303 46594393 ~ 46595176 (-)
G713851 NA non-coding downstream 18979 46577291 ~ 46577500 (-)
G713848 NA non-coding downstream 21472 46574786 ~ 46575007 (-)
G713804 NA non-coding downstream 69796 46524775 ~ 46526683 (-)
G713794 NA non-coding downstream 104776 46491362 ~ 46491703 (-)
G713884 NA non-coding upstream 19293 46626609 ~ 46627141 (-)
G713887 NA non-coding upstream 22266 46629582 ~ 46629799 (-)
G713889 NA non-coding upstream 24210 46631526 ~ 46631850 (-)
G713890 NA non-coding upstream 26046 46633362 ~ 46633615 (-)
G713891 NA non-coding upstream 28358 46635674 ~ 46635925 (-)
G712814 NA other downstream 1138231 45457777 ~ 45458248 (-)
G711133 NA other downstream 2056975 44538793 ~ 44539504 (-)
G709454 NA other downstream 3425397 43170760 ~ 43171082 (-)
G709272 NA other downstream 3875780 42719771 ~ 42720699 (-)
G714425 LOC106568665 other upstream 571108 47178424 ~ 47178736 (-)
G715865 NA other upstream 1681626 48288942 ~ 48289581 (-)
dlg1l LOC106568684 other upstream 1934975 48356004 ~ 48616588 (-)
G716463 LOC106591423 other upstream 2152596 48759912 ~ 48761163 (-)

Expression


Co-expression Network