G713889



Basic Information


Item Value
gene id G713889
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 46631526 ~ 46631850 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU811489
CTAGTGGTTAGTTCCAACAGCGGGTTGCCATTGATAGTTAGCCCCAAGTCGAATAGTTGCGGAGAGGGTTGGAAGAATGCAGTGGTGCCTTACATCCAGTATCCGGGAGCCAGGTTCAGTCTTACAGAAACCTCTGTGGTTCTTGCCGGAATCAACATAGCGGACTCAGTTATCACCTTGCAAGCTTCAGGAATAGTCTGCCCGGATGCCATTCGCACCGGGTTGAAAGACGAGGCATGTTGGTTTGGCTGCGCCAAAGACCAAAGAACTTGGTGTATGGTATCGAGTTTCAAACCCAATCTTACCAAAATGTCCGCTCCCACAT

Function


NR:

description
uncharacterized protein LOC111188456

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU811489 True 325 lncRNA 0.50 1 46631526 46631850
Loading

Neighbor


gene id symbol gene type direction distance location
si:ch1073-184j22.1 LOC106568655 coding downstream 74635 46527650 ~ 46556891 (-)
sft2d3 sft2d3 coding downstream 167834 46462625 ~ 46463692 (-)
dusp28 LOC106568652 coding downstream 213947 46407733 ~ 46417579 (-)
LOC110529956 LOC106568794 coding downstream 236408 46388942 ~ 46395118 (-)
crfb16 LOC106568648 coding downstream 305841 46309732 ~ 46325685 (-)
pex5lb LOC106568657 coding upstream 19978 46651828 ~ 46803169 (-)
nebl LOC106568663 coding upstream 384035 47015885 ~ 47027075 (-)
dnajc1 dnjc1 coding upstream 395344 47027194 ~ 47035362 (-)
LOC110529973 LOC106568664 coding upstream 419223 47051073 ~ 47067973 (-)
LOC110529976 LOC106568668 coding upstream 598237 47230087 ~ 47260852 (-)
G713887 NA non-coding downstream 1727 46629582 ~ 46629799 (-)
G713884 NA non-coding downstream 4385 46626609 ~ 46627141 (-)
G713870 LOC106568656 non-coding downstream 24210 46596479 ~ 46607316 (-)
G713869 NA non-coding downstream 36350 46594393 ~ 46595176 (-)
G713851 NA non-coding downstream 54026 46577291 ~ 46577500 (-)
G713890 NA non-coding upstream 1512 46633362 ~ 46633615 (-)
G713891 NA non-coding upstream 3824 46635674 ~ 46635925 (-)
G713855 NA non-coding upstream 16850 46648700 ~ 46719825 (-)
G713962 NA non-coding upstream 158735 46790585 ~ 46790895 (-)
G714020 NA non-coding upstream 218853 46850703 ~ 46851098 (-)
G712814 NA other downstream 1173278 45457777 ~ 45458248 (-)
G711133 NA other downstream 2092022 44538793 ~ 44539504 (-)
G709454 NA other downstream 3460444 43170760 ~ 43171082 (-)
G709272 NA other downstream 3910827 42719771 ~ 42720699 (-)
G714425 LOC106568665 other upstream 546574 47178424 ~ 47178736 (-)
G715865 NA other upstream 1657092 48288942 ~ 48289581 (-)
dlg1l LOC106568684 other upstream 1910441 48356004 ~ 48616588 (-)
G716463 LOC106591423 other upstream 2128062 48759912 ~ 48761163 (-)

Expression


G713889 Expression in all Baseline Samples

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The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 3.
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G713889 Expression in each Bioproject

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G713889 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 60.
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Co-expression Network