G713855


Basic Information

Item Value
gene id G713855
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 46648700 ~ 46719825 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU811452
tgcgcacggtgtcccataatgacaaagcattcagaccctttcctatgagactcaaaattgagctcaggtgcatcctgtttccattgatgatccttgagatgtttctacaacttggagtccacctaaGGAAAATTCAGTTGatgggacatgatttggaaaggcacacctgtctatatatggtcccacagttgacagagccaaAACCAAGCGATGAGGTTGACGGAatttgggaagggtaccaaaataattctgcggcattgaaggtcccaaaaaacacagtggcctccatcattcttaaatagaagaagtttggaaccaccaaggctcttcctagagctagcagCTGAGtaaaactgagtaatcggggataagggtcttggtcagggaggtgacaaagaacccgatggtcactctgacagagcacttGAGTTCCTCTGTAGGAGAAACTTCgagggacaaccatctctgcagcactccaccaatcaggcctttttggtagagtgtccagacagaagccactcctcagtaaaaggcacatgacagcccgtttggagtttgccaaaaggtacctaaagactctcagatcgtgagaaaccaagattgaattctttgtcGTGAAtttcaagcgtcacatctggaggaaacctggcaccatccctacggtgaagcacggtggtggaaGCATCCTGCTGTGGTAATGTTTTCCAGAGGCAGGgacgggagactagtcaggatcgaggcaaagatgaacagagcaaagtacagagagatccttgatgaaaacctgctccagagggctcaggacctcagacccgggtgaaggttcacattccaaaaGGGCAAcgaccctatgcacacagccaagacaacgcaggagtgacatcggaacaaatctctgaatgtccttgagtggcccagccagagcctgggcttgaacccaatcaaacatctctgaagagacctgaaaatagctgtgcagaaacgCTCCCCATAaaaccagacagagcttgagaggatctgcagagaagaatgggagaaactccccaaatataggtgtgcatAGCTTGCACCGTCATACCAAAAAAGACTGCCAAAGCTGcatcaacaaaatactgagtaaattgtctgaatacttatgtaaatgtaatatttctgtaTTATCTAAAAACtactttttgctttgtcgttatggggtattgtgtgtagatggctgagataaaaaaaaaaaaaaattaaagtcaattttagaataaggctgtaacgtaacaaaatgtggaaaaagtcaaggggtctgaatactttctgaaggcactgtacataaaaaGCAAAACCTATCAAAAATTGTATTTACAGGATAATACCAATATATATTTAATGCATTTCTCTAAGAACAACTATTACATGTATTAGCAACGGAATATATTTTACTCACAATCTACAGTTGAAATGTCGCCTATAACCACAAGCACTTAAACTCAATCTGCACTTGCATATTTGTGATTAAAGGAATTGTTTGCCCAAATTACAAAATAAGTTAGTATACTTGCATGATAAGAAAACAACTATGAGCCAGCCATCACTATGGATAATATTCTCTTCTGGTCAATAGAAACATCTGATCATCTATCTTTGTAATTTGcggaactatccctttaagccaACTTAATTAAAAATAGCTGTACTTATCAATATGCAATATGTTTAGCATGTAAACATGTTGTGAAGTCATATCCTTTGTAAGCATGTACCCATCATTAGTTGTCACTTAGCTATTCCAAATGTTCATGCCACTGTATAGCATACAGTATTCCTGTAAAGAAAAATTAAACACGGGTTTATTGTCTATATTCAAATAATATTTTAGAAATTAAAGTATTGTTACATAAGATGA

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU811452 True 1891 lncRNA 0.40 2 46648700 46719825

Neighbor

gene id symbol gene type direction distance location
si:ch1073-184j22.1 LOC106568655 coding downstream 91809 46527650 ~ 46556891 (-)
sft2d3 sft2d3 coding downstream 185008 46462625 ~ 46463692 (-)
dusp28 LOC106568652 coding downstream 231121 46407733 ~ 46417579 (-)
LOC110529956 LOC106568794 coding downstream 253582 46388942 ~ 46395118 (-)
crfb16 LOC106568648 coding downstream 323015 46309732 ~ 46325685 (-)
nebl LOC106568663 coding upstream 296060 47015885 ~ 47027075 (-)
dnajc1 dnjc1 coding upstream 307369 47027194 ~ 47035362 (-)
LOC110529973 LOC106568664 coding upstream 331248 47051073 ~ 47067973 (-)
LOC110529976 LOC106568668 coding upstream 510262 47230087 ~ 47260852 (-)
LOC110529977 LOC106568669 coding upstream 563914 47283739 ~ 47295308 (-)
G713891 NA non-coding downstream 12775 46635674 ~ 46635925 (-)
G713890 NA non-coding downstream 15085 46633362 ~ 46633615 (-)
G713889 NA non-coding downstream 16850 46631526 ~ 46631850 (-)
G713887 NA non-coding downstream 18901 46629582 ~ 46629799 (-)
G713884 NA non-coding downstream 21559 46626609 ~ 46627141 (-)
G713962 NA non-coding upstream 70760 46790585 ~ 46790895 (-)
G714020 NA non-coding upstream 130878 46850703 ~ 46851098 (-)
G714168 NA non-coding upstream 141491 46861316 ~ 46861673 (-)
G714190 NA non-coding upstream 179599 46899424 ~ 46899756 (-)
G714193 NA non-coding upstream 183738 46903563 ~ 46903762 (-)
G712814 NA other downstream 1190452 45457777 ~ 45458248 (-)
G711133 NA other downstream 2109196 44538793 ~ 44539504 (-)
G709454 NA other downstream 3477618 43170760 ~ 43171082 (-)
G709272 NA other downstream 3928001 42719771 ~ 42720699 (-)
G714425 LOC106568665 other upstream 458599 47178424 ~ 47178736 (-)
G715865 NA other upstream 1569117 48288942 ~ 48289581 (-)
dlg1l LOC106568684 other upstream 1822466 48356004 ~ 48616588 (-)
G716463 LOC106591423 other upstream 2040087 48759912 ~ 48761163 (-)

Expression


Co-expression Network