G714235



Basic Information


Item Value
gene id G714235
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 46969202 ~ 46969837 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU811843
GTTTAAACTGTTTCTTTGATCAAGATTATAACGAAAATCCTGATAAGAAGAGTTATGATTCTGATGTAGGCCTGGAACAGTCAATGTAATACATATGTTGGTCTTTGTTAGGTTGTATTTGGATAACAAGAGATAgttctaataaaaatagatgtgtgctTTTTAACattctaataaaaatagatgtgtgctTTTTAACattctaataaaaatagatgtgtgctTTTTAACATTCTAATAAAAATAGAGGTGTGATTGGATGTATAATATTTAATCATAGGGTGGATATGTTatgggatttttatgaataatgactaaattatgtatacatttaacttagaactataactaaacagaatactactatgttactgtatgaatgtatgaatcttattataatcataatactgaatataatgtgtgtagttttagtcaataattagaacaaggactttctgttccttgttagaaacgaatggagctatcgtcagaccggctggaatactgtgttccttacaggacattctgtccctacccagggaggggagagaccttgggcttgtagtagagtgtttaacaggtggcagacaatgtgagaaggcttgtgaactatattgccattgtatctgagaggag

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU811843 True 636 lncRNA 0.32 1 46969202 46969837

Neighbor


gene id symbol gene type direction distance location
pex5lb LOC106568657 coding downstream 166033 46651828 ~ 46803169 (-)
si:ch1073-184j22.1 LOC106568655 coding downstream 412311 46527650 ~ 46556891 (-)
sft2d3 sft2d3 coding downstream 505510 46462625 ~ 46463692 (-)
dusp28 LOC106568652 coding downstream 551623 46407733 ~ 46417579 (-)
LOC110529956 LOC106568794 coding downstream 574084 46388942 ~ 46395118 (-)
nebl LOC106568663 coding upstream 46048 47015885 ~ 47027075 (-)
dnajc1 dnjc1 coding upstream 57357 47027194 ~ 47035362 (-)
LOC110529973 LOC106568664 coding upstream 81236 47051073 ~ 47067973 (-)
LOC110529976 LOC106568668 coding upstream 260250 47230087 ~ 47260852 (-)
LOC110529977 LOC106568669 coding upstream 313902 47283739 ~ 47295308 (-)
G714232 LOC106576489 non-coding downstream 5153 46963776 ~ 46964049 (-)
G714200 NA non-coding downstream 17464 46914264 ~ 46951738 (-)
G714193 NA non-coding downstream 65440 46903563 ~ 46903762 (-)
G714190 NA non-coding downstream 69446 46899424 ~ 46899756 (-)
G714168 NA non-coding downstream 107529 46861316 ~ 46861673 (-)
G714236 NA non-coding upstream 44 46969881 ~ 46973069 (-)
G714240 NA non-coding upstream 4208 46974045 ~ 46974336 (-)
G714259 NA non-coding upstream 26799 46996636 ~ 46996931 (-)
G714263 LOC106568662 non-coding upstream 28558 46998395 ~ 46998644 (-)
G714265 NA non-coding upstream 30646 47000483 ~ 47000699 (-)
crfb16 LOC106568648 other downstream 643521 46309732 ~ 46325685 (-)
G712814 NA other downstream 1510954 45457777 ~ 45458248 (-)
G711133 NA other downstream 2429698 44538793 ~ 44539504 (-)
G709454 NA other downstream 3798120 43170760 ~ 43171082 (-)
G709272 NA other downstream 4248503 42719771 ~ 42720699 (-)
G714425 LOC106568665 other upstream 208587 47178424 ~ 47178736 (-)
G715865 NA other upstream 1319105 48288942 ~ 48289581 (-)
dlg1l LOC106568684 other upstream 1572454 48356004 ~ 48616588 (-)
G716463 LOC106591423 other upstream 1790075 48759912 ~ 48761163 (-)

Expression



Co-expression Network