G714266 (LOC106568662)



Basic Information


Item Value
gene id G714266
gene name LOC106568662
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 47001045 ~ 47001685 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU811875
gagaagacaagagtaggggagaggacgggGTGAGGTTAAGCAGGAAAAAGTACTGGAATAGTATTAAGTtgtctttttttaaataaaaaaaacatttaaaaaaggagTGGGGCTGTCCCACTCCATTCTTTTTTTTGTATTGGACAGGATATTCCCCATCGCAGGAAAACCAGCCCAGTGAGTGCTACACTTAAATAGTTCCCCACACTACATCTAGACTACTCCCCCTCGGAGGAGGATTTTCAGACAATGCCGTATGAACTCACCGAGGCCACGCCCATGATGCGAGGGAAGGTGAGGGAGGCGCAAGCGTCGGGTGTCTGTCCGTAGGTGGTATAGGGCGTCTGAAACCAGGATTTCTCGTTGGCCCAGACAACGTCACACAGCGGGAGGATAGAGGCTCCGAGGCCCACCGCCGGTCCATTCACGGCTACGATGATGGGCTTCTTGAATTGGATGAATGTGTTCACGAATGTCCTGAGGATGGAGATGACAGACTGTCTGCATAACAGTCTTCTGTGGCATCATTACAAAGACTAAACTAAATCAAAATAAAGTGGCGCACACTCCATATACAGtgtaagtcagaagtttacatacaccttagccaaacacatttaaactcaagtttcacaattcct

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU811875 True 641 lncRNA 0.47 1 47001045 47001685
Loading

Neighbor


gene id symbol gene type direction distance location
pex5lb LOC106568657 coding downstream 197876 46651828 ~ 46803169 (-)
si:ch1073-184j22.1 LOC106568655 coding downstream 444154 46527650 ~ 46556891 (-)
sft2d3 sft2d3 coding downstream 537353 46462625 ~ 46463692 (-)
dusp28 LOC106568652 coding downstream 583466 46407733 ~ 46417579 (-)
LOC110529956 LOC106568794 coding downstream 605927 46388942 ~ 46395118 (-)
nebl LOC106568663 coding upstream 14200 47015885 ~ 47027075 (-)
dnajc1 dnjc1 coding upstream 25509 47027194 ~ 47035362 (-)
LOC110529973 LOC106568664 coding upstream 49388 47051073 ~ 47067973 (-)
LOC110529976 LOC106568668 coding upstream 228402 47230087 ~ 47260852 (-)
LOC110529977 LOC106568669 coding upstream 282054 47283739 ~ 47295308 (-)
G714265 NA non-coding downstream 346 47000483 ~ 47000699 (-)
G714263 LOC106568662 non-coding downstream 2401 46998395 ~ 46998644 (-)
G714259 NA non-coding downstream 4114 46996636 ~ 46996931 (-)
G714240 NA non-coding downstream 26709 46974045 ~ 46974336 (-)
G714236 NA non-coding downstream 27976 46969881 ~ 46973069 (-)
G714262 NA non-coding upstream 2282 47003967 ~ 47010269 (-)
G714271 NA non-coding upstream 13914 47015599 ~ 47015811 (-)
G714276 NA non-coding upstream 34342 47036027 ~ 47036317 (-)
G714279 NA non-coding upstream 43019 47044704 ~ 47045496 (-)
G714290 NA non-coding upstream 67891 47069576 ~ 47069788 (-)
crfb16 LOC106568648 other downstream 675364 46309732 ~ 46325685 (-)
G712814 NA other downstream 1542797 45457777 ~ 45458248 (-)
G711133 NA other downstream 2461541 44538793 ~ 44539504 (-)
G709454 NA other downstream 3829963 43170760 ~ 43171082 (-)
G709272 NA other downstream 4280346 42719771 ~ 42720699 (-)
G714425 LOC106568665 other upstream 176739 47178424 ~ 47178736 (-)
G715865 NA other upstream 1287257 48288942 ~ 48289581 (-)
dlg1l LOC106568684 other upstream 1540606 48356004 ~ 48616588 (-)
G716463 LOC106591423 other upstream 1758227 48759912 ~ 48761163 (-)

Expression


G714266(LOC106568662) Expression in all Baseline Samples

Bar chart with 20 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 0.3.
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G714266(LOC106568662) Expression in each Bioproject

Bar chart with 13 bars.
G714266(LOC106568662) Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 3.
End of interactive chart.

Co-expression Network