G714279


Basic Information

Item Value
gene id G714279
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 47044704 ~ 47045496 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU811893
GCCAAGCGCGAGATCCAATTGTATCATATATTTGCATATTTTCATTAGGGAACGCCTCCTCTGTGAAGTGCGCATGTGCACAAACTGAAGTCGACCTTGCACTCTTTCTAAACAACGCAATTTTGGGAAACTTTGGCCAAGCCTACAAAACGTAGTGCACTGTGTAACAGATTTTCGTTTTTggaacaaacatttattgagatCAGGTGTttcatcaatatattttttttgcagaATGTCGGTCTAGTTTCCATCCTCTCCCACTACCCACGTCTCGACTTCCCCTCACTACCATATTTGATGGTGAGAAAACGTTCTAAAAAGATGCTTCAACTTTATGCCACTGTCTGGGGTTCCCCTTATGTCTGTGTAGCAACTTTGATGAAAAATGCCCCCAATTTATTCTACAAAATCAATGTCACCCCCCACAAAATGTTGTGACATGTAATATAGAAGCAATTTTATAAAGATTGACAACATTTGTATCTGTTCGACAGGGGTTTATTGCGACAAACGATGATGGAAACTGTGTTTTTCGAATAAATGATGATTGCCGAATACAGGTCCACTCTACATTTGAATTCTAAATGCCCACTGCTtgcaaaataaaacatttcaactATAAAAATGTTTCTTTGCAGGCTCCTTGTCC
>TU811892
GTTGCCTTGTCTAAATTAGGAAATTCCACCAATTTTGAAATAGCAACCAAAGATttgtataactaaaccaagatagttCATCTGGGTTGTTTACCCAGATGAAAATGAAGCATAGTGGGCAGTACAAAAAAGGTGGGCAAAGCCAAGCGCGAGATCCAATTGTATCATATATTTGCATATTTTCATTAGGGAACGCCTCCTCTGTGAAGTGCGCATGTGCACAAACTGAAGTCGACCTTGCACTCTTTCTAAACAACGCAATTTTGGGAAACTTTGGCCAAGCCTACAAAACGTAGTGCACTGTGTAACAGATTTTCGTTTTTggaacaaacatttattgagatCAGGTGTttcatcaatatattttttttgcagaATGTCGGTCTAGTTTCCATCCTCTCCCACTACCCACGTCTCGACTTCCCCTCACTACCATATTTGATGGTGAGAAAACGTTCTAAAAAGATGCTTCAACTTTATGCCACTGTCTGGGGTTCCCCTTATGTCTGTGTAGCAACTTTGATGAAAAATGCCCCCAATTTATTCTACAAAATCAATGTCACCCCCCACAAAATGTTGTGACATGTAATATAGAAGCAATTTTATAAAGATTGACAACATTTGTATCTGTTCGACAGGGGTTTATTGCGACAAACGATGATGGAAACTGTGTTTTTCGAATAAATGATGATTGCCGAATACAGGTCCACTCTACATTTGAATTCTAAATGCCCA

Function

NR:

description
polycomb complex protein BMI-1-B-like isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU811893 False 652 lncRNA 0.39 1 47044704 47045355
TU811892 True 735 lncRNA 0.39 1 47044762 47045496

Neighbor

gene id symbol gene type direction distance location
dnajc1 dnjc1 coding downstream 9342 47027194 ~ 47035362 (-)
nebl LOC106568663 coding downstream 17629 47015885 ~ 47027075 (-)
pex5lb LOC106568657 coding downstream 241535 46651828 ~ 46803169 (-)
si:ch1073-184j22.1 LOC106568655 coding downstream 487813 46527650 ~ 46556891 (-)
sft2d3 sft2d3 coding downstream 581012 46462625 ~ 46463692 (-)
LOC110529973 LOC106568664 coding upstream 5577 47051073 ~ 47067973 (-)
LOC110529976 LOC106568668 coding upstream 184591 47230087 ~ 47260852 (-)
LOC110529977 LOC106568669 coding upstream 238243 47283739 ~ 47295308 (-)
LOC110529978 LOC106568670 coding upstream 252799 47298295 ~ 47303919 (-)
LOC110529981 LOC106568675 coding upstream 352287 47397783 ~ 47439942 (-)
G714276 NA non-coding downstream 8387 47036027 ~ 47036317 (-)
G714271 NA non-coding downstream 28893 47015599 ~ 47015811 (-)
G714262 NA non-coding downstream 34435 47003967 ~ 47010269 (-)
G714266 LOC106568662 non-coding downstream 43019 47001045 ~ 47001685 (-)
G714265 NA non-coding downstream 44005 47000483 ~ 47000699 (-)
G714290 NA non-coding upstream 24080 47069576 ~ 47069788 (-)
G714296 NA non-coding upstream 30364 47075860 ~ 47076089 (-)
G714298 NA non-coding upstream 32265 47077761 ~ 47077967 (-)
G714300 NA non-coding upstream 33602 47079098 ~ 47079448 (-)
G714318 NA non-coding upstream 44019 47089515 ~ 47089752 (-)
crfb16 LOC106568648 other downstream 719023 46309732 ~ 46325685 (-)
G712814 NA other downstream 1586456 45457777 ~ 45458248 (-)
G711133 NA other downstream 2505200 44538793 ~ 44539504 (-)
G709454 NA other downstream 3873622 43170760 ~ 43171082 (-)
G709272 NA other downstream 4324005 42719771 ~ 42720699 (-)
G714425 LOC106568665 other upstream 132928 47178424 ~ 47178736 (-)
G715865 NA other upstream 1243446 48288942 ~ 48289581 (-)
dlg1l LOC106568684 other upstream 1496795 48356004 ~ 48616588 (-)
G716463 LOC106591423 other upstream 1714416 48759912 ~ 48761163 (-)

Expression


Co-expression Network