G714422


Basic Information

Item Value
gene id G714422
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 47172988 ~ 47174008 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU812040
caaaaaaatcgaaagaatttcgaaaaacagTCCAGAAAGCAATTTTTACGGGGGTGATACGTTTTTGAAAAGCAGTTCACATTTTCGAcatttgacttcctatgaaatcatattgcaaatggacaaaacatataccttatgcacaagtaaaaaaaatagtttttttaaatgatgaaaataaaatatgactaaagtatgttgatacagttatTATatgtgtgtaattgacacaacattctaaagaatttcgaaaaacagtccagaaagcacttttttaagggtgtgtgaagttttttcAAAATTTCTGCTAtatttgacttttgacttcctatgaaatcatattgcaaatggacaaaacatatgccttatgcgcaagcaaaattaaaattaaaaaaattatgaTTCAtgcagttcttacacatgtgtaattgaaaatgttcactttttcaaaatttagcttttggatgttgacttgtgttgcatttgcaatatgaaaaaccaCGGTGGAGCGCGCTCACCACCTGTTGGATTTTTAAAGTGTTACAcctggcatttgccatatggcatttgcaatcaactttgaacGAAACGACGCCgaattgagtggtattggacaccgtgtatatggtttgtccagtgccaatgacttcccattcatttttgtccatttcagggggttGCACCAGCTAGGGTTGCAAAATAACTGAAACTTTCCCAAAGTTCATAGTTTTTTTCATTTAAAAGATTTCTGGAATTAGgaaggaataagcaggaaatccttcAACTGGGAATCCAGTAATTCTGCAACCAGTTTATTACTTGTAAATGCTAAGGGGGAGTAACAGAATGGAAGAATTGGGTTAGTTGCTCACTGAGTAGAAGGCCTCCTCAAAAACCAGGAGGGGTCCAGAGAAGCCCACCACCAGCAGAGGCTGTGCCCCCAGGAGGGAAAAGATGACCCCCTGCATCGCCGTGGCGATGATCAGCTCCGACACGCCAATCAACCCCCCTGTTTTCTCAc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU812040 True 1021 lncRNA 0.38 1 47172988 47174008
Loading

Neighbor

gene id symbol gene type direction distance location
LOC110529973 LOC106568664 coding downstream 105015 47051073 ~ 47067973 (-)
dnajc1 dnjc1 coding downstream 137626 47027194 ~ 47035362 (-)
nebl LOC106568663 coding downstream 145913 47015885 ~ 47027075 (-)
pex5lb LOC106568657 coding downstream 369819 46651828 ~ 46803169 (-)
si:ch1073-184j22.1 LOC106568655 coding downstream 616097 46527650 ~ 46556891 (-)
LOC110529976 LOC106568668 coding upstream 56079 47230087 ~ 47260852 (-)
LOC110529977 LOC106568669 coding upstream 109731 47283739 ~ 47295308 (-)
LOC110529978 LOC106568670 coding upstream 124287 47298295 ~ 47303919 (-)
LOC110529981 LOC106568675 coding upstream 223775 47397783 ~ 47439942 (-)
LOC110529117 NA coding upstream 481044 47655052 ~ 47656068 (-)
G714421 NA non-coding downstream 116 47172609 ~ 47172872 (-)
G714420 NA non-coding downstream 566 47171824 ~ 47172422 (-)
G714418 NA non-coding downstream 3059 47169327 ~ 47169929 (-)
G714414 NA non-coding downstream 8848 47163855 ~ 47164140 (-)
G714393 NA non-coding downstream 53558 47118743 ~ 47119430 (-)
G714423 LOC106568665 non-coding upstream 2791 47176799 ~ 47177022 (-)
G714424 NA non-coding upstream 3711 47177719 ~ 47177947 (-)
G714428 NA non-coding upstream 17326 47191334 ~ 47191962 (-)
G714429 NA non-coding upstream 19349 47193357 ~ 47196528 (-)
G714430 NA non-coding upstream 23648 47197656 ~ 47198344 (-)
crfb16 LOC106568648 other downstream 847307 46309732 ~ 46325685 (-)
G712814 NA other downstream 1714740 45457777 ~ 45458248 (-)
G711133 NA other downstream 2633484 44538793 ~ 44539504 (-)
G709454 NA other downstream 4001906 43170760 ~ 43171082 (-)
G714425 LOC106568665 other upstream 4416 47178424 ~ 47178736 (-)
G715865 NA other upstream 1114934 48288942 ~ 48289581 (-)
dlg1l LOC106568684 other upstream 1368283 48356004 ~ 48616588 (-)
G716463 LOC106591423 other upstream 1585904 48759912 ~ 48761163 (-)
G716480 tnk2 other upstream 1608113 48782121 ~ 48782515 (-)

Expression

G714422 Expression in all Baseline Samples

Bar chart with 20 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 3.
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G714422 Expression in each Bioproject

Bar chart with 18 bars.
G714422 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 60.
End of interactive chart.

Co-expression Network