G714429


Basic Information

Item Value
gene id G714429
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 47193357 ~ 47196528 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU812047
GCAATGTAGCTAAAGCCAAAGCACTTGAACCATGATTGTTTCCTAAGAAAATATATGGATATATTTGTATGTAATATATTTTCTTTCTTCTTTATTTGTCACTCATGCTATACTATTTGCAGTTAATTATCCCAAAGCAATGTtttttggtttaaaaaaacaacaaccttttcctccccaatttcgttgCAAAGCTAGCATCCAGAAATATGCTAAAATATTTGTGGCATCTTATGCTCTCTCACATTGTATTTTGAGTGGAAAGATGAGATGACCTGGTGAACTTGACAAAGcacacaaactgaaaactgtAACAACAGCAAGCAAATCTGCAAAGGAGGCAATTTGGACCACATGATGACAACAAACACATACATGGCAGCCACTGCTCTTCCTTTGCAGTGATTCAACGAGACACAGTCTTCCTACTACACACTTTTGAAATACTTGCAAACAACTGTAATTTTTCAGTGCACCGGTATGATGTTTAACTTTCTGGTAGAAAGTAAACATAATCTCAATAACGTGTATTATGACTGTGTATGTTACAACACATTCAGTGACATTTTAAGATGGAAACAGCTGTAATTAATGGACTATCCTCATTGGCTTTATAGACATGATTAGCTACTGGGGCCCAAAAATATGTGCATACTTAAAAATACCTTAATTTGTATTGAATAGAATGTCTCCTACTTTTGTTTACCTGTACATTAAAGccgacatactgtacatactgttgtTCAGACAGTTAAACCAAGACTATACAACTAGGAGTGCACAACAGTGAAAATCAAGTAAATCGTGGTATGTAGTGTATTCAGGTATGAAAGACTATGTAGGTAATGGGACCAAACATCTTTAACATGTTTGGAGAAGCACAATGGTGAGATCTAAGCAGCATGTGATCGGTAGAAAGCGACTTACAGTATGTGCTCTTCAAATAATATGTGGTTTGTCATTCCCACAGgataggattttttatttattattgacACCTTTTGCCAAATTAATTAATGAAGGCTTCTCCTGTGTATCATCCCAAATACACACAATTGGGTACTGTAGTGCTACTTTATTGCTAGGGTTGTATTCATTCAATTGCAAATAATGAATCAATTTGAATAAGGGCTGCTTTTAAACAACAGTGTCAAATCTGGTTACCACCTACACGTACAAAACGTTATGTTACCCAGAGGTGGATCCATATCCTGTATAAAACATTCCAATTCCAATTGACTTTAGTCCAGTACAATATGTCTAACTTGTATCGTACCTCAAATTGCTTAAATTCAAGTGTGGCAAATAGCTTGTGACTGTGatagttgagatgactaaactaaactaaactaattttgtcgcaccttgactactgttcagtcgtgtggtcaggtgccacaaaaaaggactgaGGAAAATTGCaactggctcagaacagggcagcacgactGACCCCtcgatgtacacagagagctaatattagtAATATGCaggtcaatctctcctggctgaaagtggagaggagattgacttcatcactacttgtatttgtgagaggtattgacatgttgaacgcaccgagctgtctgtctaaacttctggcacacagctcggacacccatacataccccacaagacatgccacaagaggtctcttcacagtccccacgtccagaacagactatgggaggaccacattactacatagagccatgactacctggaactctattccacatcaagtaattgactcaagcagtaaaattaggtttaaaaagacaaaaaaacaccttatggaacagcagggactgtgaagcaacacaaacattggcacagacacacgcatgtatgcacacacacgataacatacgcactatacatacacatggatttagtactgtagatatgtggtagtggtggagaaggggcctgagggcacgcagtgtgttgtgaaatctgtgaatgtattgtaatgttttttttttacaattgtataaactgcctttattttgctggaccccaggaagagcagctgctgcattggcagcagctaatggggatccataataaatgcaAATACCATTCAAACCATATTATACATAAAGTTATAATGGTGTCACAGTCACATGCTATTTGCCCAAAGAGAGTTGGACAggccccacaaacacacactgcaaaTAATTGGTTCTATAATGCAAAGCTCTATAATGCAAATATTTTCTACTCATGTATTTAAGCAATTTGAGGTACAGTACAAGTTAAACATATTGTATTGGTCTAAAGGCAATTGGAATTGTGCACAGAAACCCTCCTCATTGAAAACAACAATTAACTGAGCGTGGCCTAGTTGCCCTTTTGATGGGGAACCATTAGATTTATCAGGTTTTTGTTGCTTTTACTTCTGTCAGTGTGCATTATAGTAAGTGCTTCTCAGTGAAGCTACAACATTAATTAAATGAATTTGCCATACTGGAGGGCCATGTAAAATCATGTGAATTGAGAACCATGTAGTGTACATTTTACCCACTCTTGAATGAAACATGTACCATAGTAGTAATAAATATGTAACATTCAAAAGACTACTGCAATGATACGCCTAACCGTGGGAACTAGACTGAATggtaaatgtttgtctatgaCTATGTTGTACATGTATATATTCATCAGTACAATGTGATAAGATGTATACTACATCTGTACTGATCCTATCGTATTAAAGTGCTTCTTCTTAGGTCATGACCTCAGAGGATGTGGTTTCTGCTAAAAGCCCAATTCCGATGCACACTTTGCGCAGAAGGTGGAGACttggaatagggctctagtctttGACACATAGCAATTCAAACTCCATCCAGGACAAATCCACCTTCCAAAAAGCAATATAGTGAAAATAGACACAAAAAAATATGATTTGGGAGTTGGGACCCTAAAAAGCTTTCAAgacaattacatttaaaaaaatgagtaaaacatttcaaaCCATCAGTGGTGCGTTATAAAATATCAGGTGAACAAACAAAGGATTTGGTGGGTTTGGAGCAACTTCCTGGAGTATACTGTAGGGCTAGGGTGTATTGTGGTTGGCAGAATGTCCATCACGTTGGCACCATCTCTGTGTACTcatcctgtccctccctctcatcaAACTTAGGTTCTGTGTCATCTGCATCCA

Function

NR:

description
unnamed protein product

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU812047 True 3172 lncRNA 0.38 1 47193357 47196528

Neighbor

gene id symbol gene type direction distance location
LOC110529973 LOC106568664 coding downstream 125384 47051073 ~ 47067973 (-)
dnajc1 dnjc1 coding downstream 157995 47027194 ~ 47035362 (-)
nebl LOC106568663 coding downstream 166282 47015885 ~ 47027075 (-)
pex5lb LOC106568657 coding downstream 390188 46651828 ~ 46803169 (-)
si:ch1073-184j22.1 LOC106568655 coding downstream 636466 46527650 ~ 46556891 (-)
LOC110529976 LOC106568668 coding upstream 33559 47230087 ~ 47260852 (-)
LOC110529977 LOC106568669 coding upstream 87211 47283739 ~ 47295308 (-)
LOC110529978 LOC106568670 coding upstream 101767 47298295 ~ 47303919 (-)
LOC110529981 LOC106568675 coding upstream 201255 47397783 ~ 47439942 (-)
LOC110529117 NA coding upstream 458524 47655052 ~ 47656068 (-)
G714428 NA non-coding downstream 1395 47191334 ~ 47191962 (-)
G714424 NA non-coding downstream 15410 47177719 ~ 47177947 (-)
G714423 LOC106568665 non-coding downstream 16335 47176799 ~ 47177022 (-)
G714422 NA non-coding downstream 19349 47172988 ~ 47174008 (-)
G714421 NA non-coding downstream 20485 47172609 ~ 47172872 (-)
G714430 NA non-coding upstream 1128 47197656 ~ 47198344 (-)
G714435 NA non-coding upstream 6124 47202652 ~ 47202881 (-)
G714440 LOC106562530 non-coding upstream 11451 47207979 ~ 47208345 (-)
G714689 NA non-coding upstream 32239 47228767 ~ 47229293 (-)
G714425 LOC106568665 other downstream 14621 47178424 ~ 47178736 (-)
crfb16 LOC106568648 other downstream 867676 46309732 ~ 46325685 (-)
G712814 NA other downstream 1735109 45457777 ~ 45458248 (-)
G711133 NA other downstream 2653853 44538793 ~ 44539504 (-)
G715865 NA other upstream 1092414 48288942 ~ 48289581 (-)
dlg1l LOC106568684 other upstream 1345763 48356004 ~ 48616588 (-)
G716463 LOC106591423 other upstream 1563384 48759912 ~ 48761163 (-)
G716480 tnk2 other upstream 1585593 48782121 ~ 48782515 (-)
G716488 NA other upstream 1591993 48788521 ~ 48788962 (-)

Expression


Co-expression Network