XLOC_026249


Basic Information

Item Value
gene id XLOC_026249
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007114.7
NCBI id CM002887.2
chromosome length 62628489
location 17943289 ~ 17944235 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00052451
CAAAAAAATTAGTGCCTTGATGTCAGAGAGCTACGAGAAGCATGGCTTCAGCCATCTAGAAACCTACAGAAGAGGAAGGCACCAGATAGATGCTTGTCACAGTATTTAGAGTGCACATTTTCTCAAAACTGATATGATCGAGACTGACATGTAGAGAGAGTAAATGTACTATCACAGGTGAATACACTGGATTTATGAAAGAGCAGATCGTACACGTAATGAAGAGCAGAACAGGCATGTTTTATGCTAACATAACGAACTGTAGATGGTTTGAGCAACACTGTAAACGGTAAGACAGACGAGAGATCATTCTctttcatacacaaacacacacacttcagcctAAAAACATGAGACAGAGTAGCTATGtagtcttaataataaaaaagaaaacctaTTGAGTGATTGTAGGAATTGTTTTTTTTGGAGTTTTCCTCTTTTTGGCAACagtcatgcacacatacacactaaacAGATCACTATTGGTGAGATTGGAACAAAGGTGCAGCATAAATTCATGGAAAACACCAGCTCTACAATGGCTGGAGAAAGAGAGGAACACTGAAGAATCACATACTAGTCTAACATATGTATACTTCGTACCAAAACGCCTCGCAATGCTTATTTTTCCCTCAATGGTAAAATAATTGGATGGTTcacataaaaatgtacatttactcaccatcaaaTGATTCCAAACCTTTGCGTGTTTCCTtttgctgttaaacacaaattatgttagaaacctgtaaccatccacTTTCAAAGCagtgcagaaaaaaaacacaatgaaagGCGATGGCTAgagtttttcaacattttttagaaACTTTTTGCGTACAACTAAAAAAGTGAATCAACTGAAGGACGAGTAAATGGCAGAATtcttagttttgggtgaactatccctttaaagcctgCATCAACAAGCGAGCTGGCACGGAGTA

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00052451 True 947 lncRNA 0.38 1 17943289 17944235

Neighbor

gene id symbol gene type direction distance location
XLOC_026248 nkiras2 coding downstream 71429 17867126 ~ 17871860 (-)
XLOC_026247 CABZ01018956.1 coding downstream 226967 17715685 ~ 17716322 (-)
XLOC_026246 NA coding downstream 339140 17602486 ~ 17604149 (-)
XLOC_026245 BX470185.2 coding downstream 1040009 16900243 ~ 16903280 (-)
XLOC_026244 si:dkey-30j10.5 coding downstream 1159008 16780455 ~ 16784281 (-)
XLOC_026250 si:ch73-141c7.1 coding upstream 79740 18023975 ~ 18030938 (-)
XLOC_026251 hsd17b1 coding upstream 94737 18038972 ~ 18047150 (-)
XLOC_026252 NA coding upstream 165140 18109375 ~ 18292217 (-)
XLOC_026253 BX649434.3 coding upstream 325808 18270043 ~ 18274691 (-)
XLOC_026254 spag9a coding upstream 359172 18303407 ~ 18373604 (-)
XLOC_026241 NA non-coding downstream 1279261 16632110 ~ 16664028 (-)
XLOC_026237 NA non-coding downstream 1653463 16232509 ~ 16289826 (-)
XLOC_026233 NA non-coding downstream 1874752 16064873 ~ 16068537 (-)
XLOC_026257 NA non-coding upstream 517122 18461357 ~ 18464993 (-)
XLOC_026265 CU151886.3 non-coding upstream 1028173 18972408 ~ 18974640 (-)
XLOC_026268 BX546473.1 non-coding upstream 1262999 19207234 ~ 19216723 (-)
XLOC_026269 BX322663.2 non-coding upstream 1389269 19333504 ~ 19333631 (-)

Expression


Co-expression Network