G714860


Basic Information

Item Value
gene id G714860
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 47524529 ~ 47524780 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU812517
tggacattggcgagtaatgtGCTCGGGagaggtggatggtgtgctcgctttctgagtctgaccagtaggccgcTCCGTCTTCCTCTCATGCGGTGACCACGTTTTTTTGTGTCGTTCTCTGGAATAAGatcccatgtccagggtggaggtccgaacaaattatccgctttgggaaagacgtattcctggtcAAAATGTTGGTTAAGTTATCATAcattttatatccaatagttcttcctggctgtatgtaat

Function

NR:

description
PREDICTED: 39S ribosomal protein L54, mitochondrial-like isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU812517 True 252 lncRNA 0.46 1 47524529 47524780

Neighbor

gene id symbol gene type direction distance location
LOC110529986 LOC106568678 coding upstream 18295 47468480 ~ 47506234 (+)
si:dkey-154p10.3 LOC106568677 coding upstream 71993 47440133 ~ 47452536 (+)
ccr9a ccr9 coding upstream 143555 47347501 ~ 47380974 (+)
LOC110529979 NA coding upstream 226248 47296663 ~ 47298281 (+)
LOC110529975 LOC106568666 coding upstream 295194 47209551 ~ 47229335 (+)
si:dkey-181m9.8 LOC106568680 coding downstream 621010 48145790 ~ 48162546 (+)
tnk2b tnk2 coding downstream 1154033 48678813 ~ 48806257 (+)
LOC110530923 LOC106568690 coding downstream 1378157 48902937 ~ 48931678 (+)
adipoqb LOC100653481 coding downstream 1592947 49117727 ~ 49120309 (+)
LOC110529995 LOC106568692 coding downstream 1623187 49147967 ~ 49198179 (+)
G714858 NA non-coding upstream 215 47523977 ~ 47524314 (+)
G714857 NA non-coding upstream 1047 47523224 ~ 47523482 (+)
G714667 NA non-coding upstream 7771 47516521 ~ 47516758 (+)
G714663 NA non-coding upstream 13427 47510853 ~ 47511102 (+)
G714636 NA non-coding upstream 17611 47506334 ~ 47506918 (+)
G714871 NA non-coding downstream 6001 47530781 ~ 47531016 (+)
G714911 NA non-coding downstream 35825 47560605 ~ 47637411 (+)
G715072 NA non-coding downstream 172275 47697055 ~ 47697266 (+)
G715075 NA non-coding downstream 174406 47699186 ~ 47699388 (+)
G715076 NA non-coding downstream 175131 47699911 ~ 47700150 (+)
G713574 NA other upstream 755283 46715915 ~ 46769246 (+)
G713405 NA other upstream 1058302 46465398 ~ 46466227 (+)
G711912 NA other upstream 1729980 45793269 ~ 45794549 (+)
G711845 NA other upstream 1877152 45646857 ~ 45647377 (+)
G711021 NA other upstream 3075556 44448584 ~ 44448973 (+)
G716035 LOC106581475 other downstream 1012963 48537743 ~ 48544164 (+)
G716133 NA other downstream 1235563 48760343 ~ 48760740 (+)
G716862 NA other downstream 1808061 49332841 ~ 49333772 (+)
G716993 LOC100136012 other downstream 2021432 49546212 ~ 49547085 (+)
LOC118965615 NA other downstream 2328607 49853027 ~ 49854435 (+)

Expression


Co-expression Network