Gene
RNA
| Item | Value |
|---|---|
| gene id | G715088 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048572.1 |
| NCBI id | CM023226.2 |
| chromosome length | 91622588 |
| location | 47707647 ~ 47707953 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| Retrovirus-related Pol polyprotein LINE-1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU812751 | True | 307 | lncRNA | 0.31 | 1 | 47707647 | 47707953 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110529117 | NA | coding | downstream | 51579 | 47655052 ~ 47656068 (-) |
| LOC110529981 | LOC106568675 | coding | downstream | 267705 | 47397783 ~ 47439942 (-) |
| LOC110529978 | LOC106568670 | coding | downstream | 403728 | 47298295 ~ 47303919 (-) |
| LOC110529977 | LOC106568669 | coding | downstream | 412339 | 47283739 ~ 47295308 (-) |
| LOC110529976 | LOC106568668 | coding | downstream | 446795 | 47230087 ~ 47260852 (-) |
| LOC110529987 | LOC106568679 | coding | upstream | 18837 | 47726790 ~ 47894176 (-) |
| LOC110529989 | LOC106568683 | coding | upstream | 621731 | 48329684 ~ 48343010 (-) |
| dlg1l | LOC106568684 | coding | upstream | 648051 | 48356004 ~ 48616588 (-) |
| LOC118965521 | NA | coding | upstream | 823569 | 48531522 ~ 48536626 (-) |
| LOC110529994 | LOC106568693 | coding | upstream | 1414096 | 49122049 ~ 49140712 (-) |
| G715087 | NA | non-coding | downstream | 63 | 47707353 ~ 47707584 (-) |
| G715083 | NA | non-coding | downstream | 3177 | 47704219 ~ 47704470 (-) |
| G715079 | NA | non-coding | downstream | 9775 | 47697587 ~ 47697872 (-) |
| G715048 | NA | non-coding | downstream | 33756 | 47667969 ~ 47673891 (-) |
| G714876 | NA | non-coding | downstream | 174300 | 47532999 ~ 47533347 (-) |
| G715095 | NA | non-coding | upstream | 6629 | 47714582 ~ 47714783 (-) |
| G715105 | NA | non-coding | upstream | 11797 | 47719750 ~ 47720233 (-) |
| G715107 | NA | non-coding | upstream | 12861 | 47720814 ~ 47721174 (-) |
| G715110 | NA | non-coding | upstream | 14116 | 47722069 ~ 47722312 (-) |
| G715111 | NA | non-coding | upstream | 14606 | 47722559 ~ 47722797 (-) |
| G714425 | LOC106568665 | other | downstream | 528911 | 47178424 ~ 47178736 (-) |
| LOC110529973 | LOC106568664 | other | downstream | 649987 | 47051073 ~ 47067973 (-) |
| crfb16 | LOC106568648 | other | downstream | 1381966 | 46309732 ~ 46325685 (-) |
| G712814 | NA | other | downstream | 2249399 | 45457777 ~ 45458248 (-) |
| G711133 | NA | other | downstream | 3168143 | 44538793 ~ 44539504 (-) |
| G715865 | NA | other | upstream | 580989 | 48288942 ~ 48289581 (-) |
| G716463 | LOC106591423 | other | upstream | 1051959 | 48759912 ~ 48761163 (-) |
| G716480 | tnk2 | other | upstream | 1074168 | 48782121 ~ 48782515 (-) |
| G716488 | NA | other | upstream | 1080568 | 48788521 ~ 48788962 (-) |
