G715645


Basic Information

Item Value
gene id G715645
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 48111714 ~ 48113292 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU813321
GGTTTAGGGACAGGATGGCTGTTCTGGAGAGAGCCAAGAAATTAAGAGGAACCAACATCTTCCTCAATGAGGACTTATCTGAAGCTGTGAGCCAGAGGTGGAAAGAACTAATCTCAGCTATGAAAGTCTGCCGGAGATCATGggaacattatttattttttctccatATTATCTCGATCtccattaacctttctgatctccccatcccggatccgggatcgtgaatacagactcaagctcattaccataacgcaacgttaactattcatgaaaatcgcaaatgaaatgaaataaatatgctagctctcaagcttagccttttgttaacaacactgtcatctcagattttcaaaatatgcttctcaaccattgcaaaacaagcatttgtgtaacagtattgatggctaacgtagcatttagcattagcattcagctggcaacatttacacaaaaaaacagaaaagcattcaaataaaatcatttacctttgaagaacttcagatgttttcaatgaggagactctcagatagcaaatgttcagtttttcctgaaagattatttgtttaggacaaatcgctccgttttctgcgtcacgtttagctatgaaaaaacccctgtatccaggattgtgtaaatctatcagcaagctccttagcataacacaacgttaactattcatgaaaatcgcaaatgaaatgaaataaatatgccatctctcaagcttagccttttgtaaacaacattgtcatctcagattttcaaaatatgcttctcaaccataggaaaacaataatttgtgtaaaagtagctagctagcgttagcatttagcgttagcatttagcgttagcatttagcgttagcatccagcacgcaacatttcaacaaaaacataaaagccttcaaataaaatcatttacctttgaagaacttttgatgttttcaatgaggatactctcagttagatagcagatgctcagtttttccaaaaagattatttgtgtattagaaatagctccgttttatacatcacatttggctaccaaaaaaacccgaaaattcagtcctcaaaacgcaaacttttttccaaattaactccataatatcgactgaaaacatggcaaacgttgtttagaatcaatcatcaaggtgtttttcacatatctcttcattgatatatcgttcttggacacatggtttctcccctatatcaaatggaaaagtacaagcagctggcaattgcgcaccgaattccacgcaggacaccaggcggacacttggaaaatgtagtctcttatggtcaatcttccaatgatatgcctacaaatacgtcacaatgctgctaagaccttgggcgaacgacaaagtgtaggctcattccttgcgcaatcacagccatataaggagacgatggaaaacagagcttcagaaattctgctaatttcctggttgatgcatcatcttgttttcgcctgtagaatgagttctggggcacttacagacacaatctttgcagattctgaaacttcagagtgttttctttccaaaactgtcagaatatgcatagtcgagcatattttc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU813321 True 1579 lncRNA 0.38 1 48111714 48113292

Neighbor

gene id symbol gene type direction distance location
LOC110529987 LOC106568679 coding downstream 217538 47726790 ~ 47894176 (-)
LOC110529117 NA coding downstream 455646 47655052 ~ 47656068 (-)
LOC110529981 LOC106568675 coding downstream 671772 47397783 ~ 47439942 (-)
LOC110529978 LOC106568670 coding downstream 807795 47298295 ~ 47303919 (-)
LOC110529977 LOC106568669 coding downstream 816406 47283739 ~ 47295308 (-)
LOC110529989 LOC106568683 coding upstream 216392 48329684 ~ 48343010 (-)
dlg1l LOC106568684 coding upstream 242712 48356004 ~ 48616588 (-)
LOC118965521 NA coding upstream 418230 48531522 ~ 48536626 (-)
LOC110529994 LOC106568693 coding upstream 1008757 49122049 ~ 49140712 (-)
LOC118965653 NA coding upstream 1283507 49396799 ~ 49396853 (-)
G715585 NA non-coding downstream 35543 48075870 ~ 48076171 (-)
G715581 NA non-coding downstream 37184 48074163 ~ 48074530 (-)
G715578 NA non-coding downstream 39410 48071971 ~ 48072304 (-)
G715572 NA non-coding downstream 45683 48065799 ~ 48066031 (-)
G715565 NA non-coding downstream 53050 48058427 ~ 48058664 (-)
G715625 NA non-coding upstream 6023 48119315 ~ 48120151 (-)
G715717 NA non-coding upstream 50438 48163730 ~ 48164225 (-)
G715715 NA non-coding upstream 54482 48167774 ~ 48168935 (-)
G715721 NA non-coding upstream 60721 48174013 ~ 48174231 (-)
G715725 NA non-coding upstream 67403 48180695 ~ 48181019 (-)
G714425 LOC106568665 other downstream 932978 47178424 ~ 47178736 (-)
LOC110529973 LOC106568664 other downstream 1054054 47051073 ~ 47067973 (-)
crfb16 LOC106568648 other downstream 1786033 46309732 ~ 46325685 (-)
G712814 NA other downstream 2653466 45457777 ~ 45458248 (-)
G711133 NA other downstream 3572210 44538793 ~ 44539504 (-)
G715865 NA other upstream 175650 48288942 ~ 48289581 (-)
G716463 LOC106591423 other upstream 646620 48759912 ~ 48761163 (-)
G716480 tnk2 other upstream 668829 48782121 ~ 48782515 (-)
G716488 NA other upstream 675229 48788521 ~ 48788962 (-)

Expression


Co-expression Network